| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1894 |
|---|
| Symbol | |
|---|
| ID | 8568548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 2214003 |
|---|
| End bp | 2215136 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit |
|---|
| Protein accession | YP_003291165 |
|---|
| Protein GI | 268317446 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.898697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCC GCCTGGAAGT TGTCTATCGC CTGGAGGTAC CTTCCGAGGA ACAGGGGACC
TTTGCCCGGG CGCTGCTGCT GGAGCAGACC GTCGAAACGC CCGAAGAGGT GGCGCTGCGC
GTGCCGGTGG TACGCGAGCG CCTGATGGGT GAGATCGTGG AACTGGAGCC GCTGGAAGCG
GGCGGGGCCC GGCTGGTGCT GCAGTTGCCT GTCGAAACGG CCGGCGTGGA CCCGGCCCAG
TTCGTCAACG TGCTGTTCGG CAACGCCTCG CTGCACGAAC AGGTCATACT GGAAGACTTC
GAGCTGCCGC CTGCGCTGTT CGATCGCTTC CCCGGCCCCC GATTCGGGAT CGAAGGGGTG
CGGGCATTGC TGGGCGTGCA CGATCGGCCG CTGACGGCCT CGGCGCTGAA GCCGGTGGGT
CTTTCGGTGG ACGAGCTGGC GGTACTGTGC CGGAGTCTGG CCGAGGGCGG TATCGACGTG
ATCAAGGACG ATCACTACTG GGCCGATCAT CCGTTTGCCC CGTTCGAGGA GCGCGTGCGG
CGCTGCCAGG AAGTGGTGCA GGAGGTGTCG GCGCGCACCG GCAGGCGCGT CGTGTACGCA
CCCAGCCTGT CGGGAACGCC TTCGCAGGTG CTGCGCCAGG CGGAAATCGC CCAGCAGTGT
GGCGTGGGGG CCGTGCTGCT GGCGCCCATG TTGCTGGGAT TGCCGTTCTT CTACGAGCTG
GTCACGCGGC ATCTGGAGGT GCCCGTGCTG GCCCATCCCA GCTTTGCCGG CGCGCAGCGC
ATCCTGCCTG AAACGTTGCT CGGGAAGCTG TTCCGTCTGT ACGGGGCCGA CATGATCATC
TTCCCGAGCT TTGGCGGACG GTTCAGCTAC AGTCGGGCGA CATGCCGGGC ACTGGCCGAG
CGGGCACGCC AGCCCTGGGG ACCGTACCGG CCGGCGCTGC CGGTGCCGGC CGGTGGGATG
CAGGTGGAGC GGGCGCGCGA ACTGGTTGAG TTCTTCGGGC GCGACGTCAT GCTGCTCATC
GGCGGTAGCC TGCTCCGGGC TCATCCGGGA CCGGAACTGA CGGCCCGGGC ACGTGCCCTG
GTCGAGAGTG TGGCCGAGGC TGCCGCCGCA CTTTCCGATC CGGATCTCGC TTAA
|
|---|
| Protein sequence | MDTRLEVVYR LEVPSEEQGT FARALLLEQT VETPEEVALR VPVVRERLMG EIVELEPLEA
GGARLVLQLP VETAGVDPAQ FVNVLFGNAS LHEQVILEDF ELPPALFDRF PGPRFGIEGV
RALLGVHDRP LTASALKPVG LSVDELAVLC RSLAEGGIDV IKDDHYWADH PFAPFEERVR
RCQEVVQEVS ARTGRRVVYA PSLSGTPSQV LRQAEIAQQC GVGAVLLAPM LLGLPFFYEL
VTRHLEVPVL AHPSFAGAQR ILPETLLGKL FRLYGADMII FPSFGGRFSY SRATCRALAE
RARQPWGPYR PALPVPAGGM QVERARELVE FFGRDVMLLI GGSLLRAHPG PELTARARAL
VESVAEAAAA LSDPDLA
|
|---|
| |