Gene Rmar_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1862 
Symbol 
ID8568516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2175562 
End bp2178051 
Gene Length2490 bp 
Protein Length829 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003291133 
Protein GI268317414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.499944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGGC AACTCCTCGG GCTACTGGTC ACCCTGTGCG CCTTGCCCGT CTATGCCCAG 
ACGGTCCTTT TTCAGGAGCC GATCGACACG ACCGGAACGT TTCCGGTCGG CTGGCTTACG
CGCCGCTGGA CAACGACCGA CCAGACGCCG TCGCCGGGCT CCGGCGGGTT CAGCTTCGCA
TTGCAGGGGC GCCAGGCGGA TCGACTCTGC ACCCCGGTTC TTGATGCGCG GGCGGCCACC
CCGGACACGC TGTCCTATCT GGCGCGTCGA ACGGGCTCGT ACCCGGCGTT GCATCTGGTT
GTACGGGCAT CGGTGGACGG CGGCCGCACG TTTCCTTACG TCGTCGCGCC GGCCGGCGCG
GCGCTGCCGG AGGCCGACGG AAGCTGGGCG TCGCTGCGCT TTGCCCTGCC GTCCGAAGTT
TCGGGTACGC CGACCCTGCA GCTCTGCTTC GATGCCCTCG GAGGCACCAG CGCTAGCGCC
CGCGTGCAAC TGGACGACAT TGCATTGCAC GGCACGGGGC AGCTGCGCCG GTGGCCGCTG
GCCGTATGGC CTGCACGCAT CGACGCGGGC TTCGTGGCGG TGGGCGATAC CGTGTCGCTA
CAACTGCAGG TGCGCAACCA GACCGACAGC ACGCTGGCCG TCACCCTACC ACCTCCGCCG
TCGCCCTGGT GGCTGGCGCG AACCGCCGTG GCCCTGCTGC CCCGCCAGAC CGACACGCTG
ACCCTTTTCG TGGCGCCCAC GCTGGCCGAT ACGTTTGCGG TCACCTGGGG GATACCGCTG
GAGGGCGACA CGTTCCCGGT GTCCCTGCAT GTTACCTCGA CGCCTCCGCT CCATGCGCTG
GGCTGGCATA CGCCAACCAT TGCAGCCCGC GCGCAGGATA CCGTGCAACT GGGATTGCAG
CTTCAGCTTT CGGGCGAGGC GACCGTCCTG CAGGGGCTGC TGGTGACCGC CCTGTTGCCC
GCGCACAGGC TGACCTATCT GGAGACGTTA CCCGGCGCTT CGCTACCGAA TCCGACGCAG
TGGACGCTGC AGACCGCCCG GCGTGGCGAT ACGCTCCAGG TTTTGCTGCT GGGGGACGGC
CTCCATGCGC TACCGGCCGG AAGTTATCCG GAATTGCTGC AGTTCCGGCT GGTGCCCGGC
GACGTGCCAG ACACGACCCG TCTGGTCCTG GCACTGAACG CTTTGCAGGC CACCACGGCC
ACCCCGGAGG CAGCTCCCAT GGTGCTGGCG CTCCACCCAC GGCGCCTGCA TCTCACGGTA
CGTCCGCGTA CGGCGCAGGC CATCCTTTTT CCGGATACGC TGCGATTGCC GGCCACCGTG
GCCGGAAGCC GTCAGACGGC CACCGCCTAC CTGAGCAACC CCGGCGGCGA ACGCACGCTC
CACGCCCGCG TCCTTCCTCC CTCGGACCCC ACGCTGACCG TCGCGCCCGA CTCGCTGGCT
GTTGCGCCAG GCGACACGAC CCGGCTGACG ATCACGTTTC ACCCCACGCT CCGCGATTTC
GGCTACCGCG TGGCAACGGT GCGACTCCGG CACGATGGAG TCGGCACCGA TACCCTGCTG
ATGGTCGAGG CAACGGGCGT CGGGGGTCTG GGCGACGCCA CCGAAGAAGG CGCCGTGGAC
GTGGCCGATC TGCAGCGGGG CATCCGGTTC GTGCTCGCGC TGGAAGAGCC GGAAGCACAG
GATCGGCTGG TGCTCGATGT GACGCCGTTT CCATACGGGG ATGGCCGGTT GCAGCTTGAC
GATCTGAGCG TGCTCGTGCA GGCCATCGTG CGCAACGCCT GGCCCGACGG CCATCCGCTT
CCGGTGCCGC CCCCCACACC ACCGGCGGCC GGCAAGCAGG AGGCGCCCAT CGTCTTCCGT
CCGGTCGTCA AAGCAGACGG ACGTCTGCAT CTGGAGATCG ACGCCCCACA ACCCTTTGGC
GCGCTCCAGC TCGTGCTGCC GCCCGTCTTC TGCGACACGA CCGGCACCAC GCTGCCCCCG
GAGGCCCGCC TGCTGGCCGA GACCACGCCG GACCGTCTCA CGCTGCTGCT CTATCGCCTC
GACGGGGCTT CCTTTGCGCC AGGACGTTAC CGGCTGGGCG TCCTGGAGAC GGAGCGGGCC
GACACGCTGC GCCCCGTGCG CTGGGTGGCC GTCGACGAGA CCGGCCGCTA TCTACCCACG
ACCGTTCAGC CGGCCGAAGG TACCGCGATC GCGTCCGTTC CCAGGGCACC CATTTTCTTC
CCACCTTATC CGCATCCGTT TGTCGCCGGC CAGCACACCG CGCTGGTGCT TTCGGGCGAA
CTCCCGGCCC CGAGCCCCTT CATGCTGGAA GTCTTCGACC TGCTGGGACG CCGGCTGGCC
GTCGAGCAGG GCCAGCTCCC CGGTGGATCG TTCCGGTACC GCTGGGAGGT TCGCGATGCG
CAGGGGCATC GGCTGGCGCC TGGGCTCTAT CTACTGCGTC TGCGAACGTC TTCCCACACC
CGGACCTTTC CGCTCGTCGT GCTTCGCTGA
 
Protein sequence
MKRQLLGLLV TLCALPVYAQ TVLFQEPIDT TGTFPVGWLT RRWTTTDQTP SPGSGGFSFA 
LQGRQADRLC TPVLDARAAT PDTLSYLARR TGSYPALHLV VRASVDGGRT FPYVVAPAGA
ALPEADGSWA SLRFALPSEV SGTPTLQLCF DALGGTSASA RVQLDDIALH GTGQLRRWPL
AVWPARIDAG FVAVGDTVSL QLQVRNQTDS TLAVTLPPPP SPWWLARTAV ALLPRQTDTL
TLFVAPTLAD TFAVTWGIPL EGDTFPVSLH VTSTPPLHAL GWHTPTIAAR AQDTVQLGLQ
LQLSGEATVL QGLLVTALLP AHRLTYLETL PGASLPNPTQ WTLQTARRGD TLQVLLLGDG
LHALPAGSYP ELLQFRLVPG DVPDTTRLVL ALNALQATTA TPEAAPMVLA LHPRRLHLTV
RPRTAQAILF PDTLRLPATV AGSRQTATAY LSNPGGERTL HARVLPPSDP TLTVAPDSLA
VAPGDTTRLT ITFHPTLRDF GYRVATVRLR HDGVGTDTLL MVEATGVGGL GDATEEGAVD
VADLQRGIRF VLALEEPEAQ DRLVLDVTPF PYGDGRLQLD DLSVLVQAIV RNAWPDGHPL
PVPPPTPPAA GKQEAPIVFR PVVKADGRLH LEIDAPQPFG ALQLVLPPVF CDTTGTTLPP
EARLLAETTP DRLTLLLYRL DGASFAPGRY RLGVLETERA DTLRPVRWVA VDETGRYLPT
TVQPAEGTAI ASVPRAPIFF PPYPHPFVAG QHTALVLSGE LPAPSPFMLE VFDLLGRRLA
VEQGQLPGGS FRYRWEVRDA QGHRLAPGLY LLRLRTSSHT RTFPLVVLR