| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1859 |
|---|
| Symbol | |
|---|
| ID | 8568513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 2171522 |
|---|
| End bp | 2172922 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_003291130 |
|---|
| Protein GI | 268317411 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGG CCATTGTTGG TACGGGGTAC GTCGGTCTGG TGACCGGCAC CTGCTTTGCC
GAAATGGGCA ACGAGGTGAT CTGCGTGGAC ATTGATGCCC GTAAGATCGA AAAATTGAAC
CGGGGCGAAC TGCCCATCTT CGAGCCCGGT CTGGAAATCT ATTACGAGCG TAACCGGCGG
GAAGGCCGGC TGCACTTCAC CACGTCGCTG GAAGACGCCC TGCCCGAAAG CGAGGTGATC
TTTCTGGCGT TGCCCACACC GCCGGGCGAA GACGGCTCGG CCGATCTCTC GTACGTGCTG
GGTGTCGCCG ATCAGATCGC CCGGTGGATG GTCGCCCATC CGGAGACCGG CTATAAGATC
ATCGTCAACA AGAGCACGGT GCCCGTGGGA ACGGCCGACC GTGTGCGGGA GATTTTCGAG
TCCTACGGAC TGAAGGCCGG CGAGCAGTTC GATGTGGTCT CCAATCCGGA GTTTCTCCGG
GAGGGCGTGG CCGTCGACGA CTTCATGAAA CCCGAGCGCG TGATCATCGG CACGCGCAGC
CCGCGGGCGG CCGAGATCAT GACGCAGCTC TACGAGCCGT TCGTGCGCCA GGGCAACCCG
ATCCTGGTCA TGGACGAGCG CAGCTCGGAG ATGACCAAGT ACGCGGCCAA TGCCTTCCTG
GCGACGAAGA TCACGTTCAT GAACGAGATC GCCAACGTGT GCGAGCGCGT CGGGGCCAAC
GTCGACGAAG TGCGGCGCGG GATCGGCCTC GACAGCCGCA TCGGCAAGCA GTTCCTTTAT
GCCGGGATCG GCTTTGGCGG GAGCTGCTTC CCGAAAGACG TCAAGGCGCT GGCGCGCACG
GCCGAGGAGT ACGGCTACGC GTTTCAGATT CTGAAGGCCG TGCTCGACGT CAACGAGCGG
CAGCGGCGGT TGCTGGCCGA GCGCGTCTAC GACTACTTCG AGGGACAGCT CGAAGGCCGA
CGGCTGGCCG TCTGGGGCCT GGCCTTCAAG GCGAACACCG ACGATGTGCG CGAGGCCCCT
TCACATGTGA TCATTCGCAA GCTGCTGGAG CATGGCGCCG ACCTCGTGGT GTTCGATCCG
GAAGCGATGG CAAACACGCG GGCCGTCTTC GGCGATGCGC TCACGTATGC CCCGGGCATG
TACGAAGCGC TCGACGGCGC CGAGGCGCTG ATCATCTGCA CGGAGTGGAA CGAGTTCCGG
CGGCCGGACT TTCAGCGCAT GCGGAATCGG CTGGCGCGGC CGCTGATCTT CGACGGCCGC
AACCTGTACC ATCCAAAGCG GATGGCGGAG ATGGGTTTTG AGTACTACTC GATCGGCCGG
CCGCACTATC CGCCGCACGC CAACCCGGAT CCGGTACTGC TGGCCAGTTC AAGCACAACC
GACGGAAAAA CAGGCGCATG A
|
|---|
| Protein sequence | MKLAIVGTGY VGLVTGTCFA EMGNEVICVD IDARKIEKLN RGELPIFEPG LEIYYERNRR
EGRLHFTTSL EDALPESEVI FLALPTPPGE DGSADLSYVL GVADQIARWM VAHPETGYKI
IVNKSTVPVG TADRVREIFE SYGLKAGEQF DVVSNPEFLR EGVAVDDFMK PERVIIGTRS
PRAAEIMTQL YEPFVRQGNP ILVMDERSSE MTKYAANAFL ATKITFMNEI ANVCERVGAN
VDEVRRGIGL DSRIGKQFLY AGIGFGGSCF PKDVKALART AEEYGYAFQI LKAVLDVNER
QRRLLAERVY DYFEGQLEGR RLAVWGLAFK ANTDDVREAP SHVIIRKLLE HGADLVVFDP
EAMANTRAVF GDALTYAPGM YEALDGAEAL IICTEWNEFR RPDFQRMRNR LARPLIFDGR
NLYHPKRMAE MGFEYYSIGR PHYPPHANPD PVLLASSSTT DGKTGA
|
|---|
| |