Gene Rmar_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1784 
Symbol 
ID8568436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2090207 
End bp2092996 
Gene Length2790 bp 
Protein Length929 aa 
Translation table11 
GC content66% 
IMG OID 
Productacetyl coenzyme A synthetase (ADP forming), alpha domain protein 
Protein accessionYP_003291056 
Protein GI268317337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCC GGCCTGATGT GATGCAGCAC GACCCATCTC ACGAGCTATT TCAGCCCCGG 
CGTCTGCAAC TGGACGCTAT CTTCAAACCG CGCAGCGTGG CCGTTATCGG GGCCAGCGAA
CGTCCGGGCA GCGTGGGGCG GACGCTGCTC TGGAATCTGA TCAGCAACCC GTTCGGAGGC
ACGGTCTATC CGGTCAACCC CAAGCGCACG AACGTGCTGG GCATCCGGGC CTATCCGTCC
GTGAAGGATA TTCCCGAGCC GGTGGACCTG GCCGTCATCG CAACGCCGGC CCCCACGGTG
CCCGGCGTCG TGCAGGAGTG CGTCGAGGCG GGCGTCAAAG GAGCGGTGAT CATTTCGGCC
GGTTTCAAAG AAATCGGCGA AGAAGGGCGC CGGTTGGAGG AGCAGATCCT GACGATTGCC
CGCAGGGGCG GCATGCGCAT CATCGGCCCC AACTGCCTGG GCGTCATGCG GCCGGTCACC
GGGCTGAACG CCACGTTTGC CAGCACGATG GCGCGTCCGG GTACGGTGGG CTTCATCAGT
CAGAGCGGCG CGCTGCTGAC GTCGATCCTG GACTGGAGTC TGGAAGAAAA CGTCGGCTTC
AGCGCTTTTA TCTCGATCGG CTCGATGCTC GACGTGGGCT GGGGCGACCT GATTTACTAT
CTGGGCAGCG ACCCCTACAC GAAGAGCATC ATCCTCTACA TGGAGTCGAT CGGCGATGCC
CGTTCGTTTC TGTCGGCCGC CCGCGAAGTG GCGCTCCAGA AGCCGATCAT CGTGATCAAG
GCCGGACGGA CCGAAGAAGC GGCGCGTGCG GCGCTTTCGC ACACGGGCTC GCTGGCCGGG
AGCGACGAGG TGCTCAGTGC CGCTTTCCGC CGGACGGGCG TCCTGCGCGT CGATAGCATC
GCCGACCTCT TCTACATGGC CGAAGTGCTG GCCAAGCAGC CGCGTCCCGA AGGGCCCCGG
CTGACCATTC TGACCAATGC GGGCGGCGCG GGCGTGCTGG CCACCGACGC GCTCGTGCAG
GGCGGCGGCC AGCTGGCCGA ACTTTCGGAA GAAACGAAAA AGAAGCTGGA CGAATTCCTG
CCGCCGCACT GGAGCCACGG CAATCCGGTG GACATCCTCG GCGACGCCGA TCCGGAGCGC
TACGCGAAGG CGCTGGAGGT GACGCTGGCC GACGAAAACA GCGACGGCCT GCTGGTCATC
CTCACGCCAC AGGCCATGAC CGATCCCACG CAGACGGCCG AGCAGCTCCG GCGCTTTGCG
CAGAGCCGCA AGCCGATCCT GGCCAGCTGG ATGGGCGGGG TGGAGGTGGC CGCCGGCAAA
AAGATCCTGA ACCGCGCCGG CATTCCCACC TTCCAGTACC CCGATACGGC CGTGCGCGTG
TTCAACTACA TGTGGCGCTA CAGCTACAAC CTGCGCGCCC TGTACGAGAC GCCTTCGCTG
CCCGACGATG AGATCGACGG AGGCCCGGAC CGTGAGCGGG CGCAGCAGAT CATCGAGCAG
GTGCGCCGCG AAGGGCGTAC GCTGCTGACC GAGTACGAAG CCAAGCAGGT GCTCGAGGCC
TATTGCCTGC CCGTGACGCC GACGCGCCTG GCCCGCACGG CCGACGAAGC CGTGGCGGCC
GCCGAAGAGC TGGGCTATCC CGTCGTGCTG AAGCTGCATT CGCTCAAGAT CACGCACAAG
ACCGATGTGG GAGGCGTCCA GCTCAACCTG GATTCGCCCG AGGCCGTACG GCGGGCCTTC
GATACGATCC GGCGCAACCT GGAGGAGCGC GGCCAGGCCG ACGCGTTCGA CGGCGTCACC
GTGCAGCCGA TGGTGCGGGC ACGGGACGGC TACGAACTGA TCATCGGGAG CACGATCGAC
CCGCAGTTCG GGCCGGTGCT GCTCTTCGGC GCGGGAGGAA CGCTCGTAGA GGTGTATCGC
GATCGAGCCC TGGGACTGCC GCCGCTCAAC ACGACGCTGG CGCGGCGCAT GATGGAGCAG
ACGAAGGTCT ACCGAGCCCT GCAGGGCGTG CGCGGACGGC CGCCGGTCAA CCTCGACCGC
CTCGAAAAGC TCATGGTGCG CTTCAGCCAG CTGGTCGTCG AGCAGCCCTG GATCCGGGAA
ATCGACGTGA ACCCGCTGCT GGCCGCCCCC GATCAGATCG TGGCGCTGGA CGCCCGGATC
GTACTGCATC CGCCGGACCT GCGTGAGGAG GAACTGCCGC GTCCGGCCAT TCGGCCCTAT
CCGCGTCAGT ACATGGGTAC CTGGCGCCTC AAGGACGGCA CCCCGGTGCT CATCCGGCCC
ATCCGTCCCG AAGATGAACC CCTGCTGGTG GAATTCCACC ACAAACTCTC CGAGCGCAGC
GTCTATCTGC GCTATGCCAG CCTGCTCAAG CTCAGCCAGC GCGTGGCGCA TGAGCGGCTG
GCCCGGCTCT GCTTCATCGA CTACGATCGA GAAATGGCGC TGGTGGCCGA GCGGCGCAGC
CCCGAAACCG GTCGCCCCGA GATCCTGGCC GTCGCACGAC TGACAAAGAT CTACGGCACG
AACGACGGCG AATTTGCCAT GCTCGTGCGC GACGACGTGC AGGGCAAAGG GCTGGGTACC
GAGTTGTTGC GGCGGCTGAT CCAGATCGGC GAGGCCGAAG GGCTTGAGCG CATCGTAGCC
GACATCCTCG TGCAGAACCA CGCCATGCAG CACGTGTGCC GGAAGCTGGG CTTTCGGATC
ATCCGGAGCG ATGACCCCGC CGACCCGATG GTCAAGGCTG TCAAGGTACT TCGCGTCCCC
GCCGAACGTG AATCCCTTGC AAAAGCGTAA
 
Protein sequence
MEARPDVMQH DPSHELFQPR RLQLDAIFKP RSVAVIGASE RPGSVGRTLL WNLISNPFGG 
TVYPVNPKRT NVLGIRAYPS VKDIPEPVDL AVIATPAPTV PGVVQECVEA GVKGAVIISA
GFKEIGEEGR RLEEQILTIA RRGGMRIIGP NCLGVMRPVT GLNATFASTM ARPGTVGFIS
QSGALLTSIL DWSLEENVGF SAFISIGSML DVGWGDLIYY LGSDPYTKSI ILYMESIGDA
RSFLSAAREV ALQKPIIVIK AGRTEEAARA ALSHTGSLAG SDEVLSAAFR RTGVLRVDSI
ADLFYMAEVL AKQPRPEGPR LTILTNAGGA GVLATDALVQ GGGQLAELSE ETKKKLDEFL
PPHWSHGNPV DILGDADPER YAKALEVTLA DENSDGLLVI LTPQAMTDPT QTAEQLRRFA
QSRKPILASW MGGVEVAAGK KILNRAGIPT FQYPDTAVRV FNYMWRYSYN LRALYETPSL
PDDEIDGGPD RERAQQIIEQ VRREGRTLLT EYEAKQVLEA YCLPVTPTRL ARTADEAVAA
AEELGYPVVL KLHSLKITHK TDVGGVQLNL DSPEAVRRAF DTIRRNLEER GQADAFDGVT
VQPMVRARDG YELIIGSTID PQFGPVLLFG AGGTLVEVYR DRALGLPPLN TTLARRMMEQ
TKVYRALQGV RGRPPVNLDR LEKLMVRFSQ LVVEQPWIRE IDVNPLLAAP DQIVALDARI
VLHPPDLREE ELPRPAIRPY PRQYMGTWRL KDGTPVLIRP IRPEDEPLLV EFHHKLSERS
VYLRYASLLK LSQRVAHERL ARLCFIDYDR EMALVAERRS PETGRPEILA VARLTKIYGT
NDGEFAMLVR DDVQGKGLGT ELLRRLIQIG EAEGLERIVA DILVQNHAMQ HVCRKLGFRI
IRSDDPADPM VKAVKVLRVP AERESLAKA