| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1780 |
|---|
| Symbol | |
|---|
| ID | 8568432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 2086049 |
|---|
| End bp | 2086987 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003291052 |
|---|
| Protein GI | 268317333 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.150839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC CCGCCATCGA CGTACGCGAC CTGACGCGTC GCTTCGGCAG CTTCACAGCC
GTCGATCACG TGACGTTTCA GGTGGAGGCC GGCGAGATCT TCGGCTTTCT GGGCGCCAAC
GGTGCCGGCA AATCGACCAC CATCCGCATG CTCTGCGGCC TGTTGCCGCC GTCGGAGGGC
ACGGCCCGCG TGGCCGGGTT CGACGTGGCC CGCGAGCCCT ACCGCGTGCG CCAGGCCATC
GGCTACATGG CCCAGAAGTT CTCGCTCTAC GAAGACCTGA CCGGGCTGGA GAACCTGTAC
TTCTTCGGGA CGGCCTACGG ACTGACGGGC CGCCGGCTCG AAACGCGCAT CCGCGAGGTT
ACGGCCCGCG TGGGCCTGAG CGGACAGGAA CGTCGTCTGG TGCGCGAGCT GCCCACCGGC
TGGCGGCAGC GGCTGGCGCT GGCCAGTGCG CTGTTGCACG AACCGTCCGT GGTGTTTCTG
GACGAGCCCA CCAGCGGCGT CGATCCACTG GCCCGGCGTC GCTTCTGGGA CCTGATCGCT
GAGCTGGCCG CTGAGGGCAC CACCGTGTTC GTCACCACAC ACTACCTGGA CGAAGCCGAG
TACTGCAACC GGCTGGGCCT CATCCAGAGC GGCCGGCTCA TCGCGCTGGG TGCGCCCGAG
GCGCTGAAGG CCCGCTACCT GACCCGCCCG CTGTACGAAC TGGAGGCCAT CCCATTGCGC
GCCGCCCTGG AAGCGCTGCG CCGGATGCCC GAAGTGTTCG AGGCGGATCC CTTCGGGAGC
CGCATTCACG TGACGCTGCA GGATCGCGCT CTCGATCCCG AGCTGCTCGT GCGCCGCCTG
CGCGAAGCAG GGCTGACGGT CGCCGGCATT CGCCCCATCG TGCCCACGCT CGAAGACGTG
TTTCTGCATC TGATCGAACA TCCCCCCGCC GAAACCTGA
|
|---|
| Protein sequence | MSTPAIDVRD LTRRFGSFTA VDHVTFQVEA GEIFGFLGAN GAGKSTTIRM LCGLLPPSEG
TARVAGFDVA REPYRVRQAI GYMAQKFSLY EDLTGLENLY FFGTAYGLTG RRLETRIREV
TARVGLSGQE RRLVRELPTG WRQRLALASA LLHEPSVVFL DEPTSGVDPL ARRRFWDLIA
ELAAEGTTVF VTTHYLDEAE YCNRLGLIQS GRLIALGAPE ALKARYLTRP LYELEAIPLR
AALEALRRMP EVFEADPFGS RIHVTLQDRA LDPELLVRRL REAGLTVAGI RPIVPTLEDV
FLHLIEHPPA ET
|
|---|
| |