Gene Rmar_1757 details

Gene Information

• Locus tag: Rmar_1757
• ID: 8568409
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 2047521
• End bp: 2049530
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 55%
• Product: Fibronectin type III domain protein
• Protein accession: YP_003291029
• Protein GI: 268317310

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000152672
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGGAG CATACTGGGG ACACTGGCGG GGCCTGTGGA TCAGTGCAAA AAACTGGCAG 
TCTCCAGATG GCCAGACCTT CCCGGTGCGC ATTGAGCATA TTGGCCCTCG GTTTAATGGG 
TTAGGGGAAT ATTTTCAGGA TGTGATCAAG CTGGTATATA AGTTTGATGC GCCAGAGATT 
ATCGTCGACG GGCTAACCTC TTTTGACAAG CCTGCTGTTC CGGATGAAAT TAACCCGGAT 
ATTCCTGCCG ATGCGATGGT GGAGAACATA GCCCATACGG CAATGGGAAT AGAAGTGCGT 
CGGCGGGTTT ATCAGTTTAG CAATGAGCAG CATCAGGATT ATCACATTAT TGAGTATGTG 
TTCACGAATA CAGGCAATGT GGATGAAGAT GAGGACATAG AACTGCCTAA TCAGACGCTG 
GAGGACGTTT ATTTCACCTT CTTCTACCGC AACAAAGCCA ATGCGCCGGC TGGGGCCTGG 
GATAACTCAG CGGGAGGTGC TGCGTGGGGG AAGTACACCA TGAATGACGC CCTGGTGCCG 
GACTGGGCTG ATATGCCAGG TGAGCAGTTT AGCGAGCAGT TTGCGCAAGG CTACGACTTC 
TGGCAAGATC ATGCCGCGCA GTTCTCCTGG CTGGGGCATG TGCCGGATCA GACCAACTTT 
AATACCATTG GTAATCCCAT GTGGTTTGAG CTCCAGCCCT GGATCGCGCA CATCGGCGGC 
GATACGACAG GACGCCTAGG AGCAGCCGCT ATGTTCGGCA CGCTGACGGT TCATGCCGAC 
CGCTCGGCAA GTGACGAATC GCACGATAGA GCGCAGCCGA GCATGATGGA CATCCTGGAC 
TCAGACGATG CCGACCTGAC CAGCCGGAAT GATCACAATG ATATTAATCA GATGCAGTTC 
GAGCGGGACT GGCTAGAAGA TGGGTTCAAG AATGGGACAG GGTCGGCTCG CTATAGCGAT 
GAGAAGCCGC CGCATGCCTG GCGTATTCAG CCAGATGGTG ATTTTGCGCG GCAGACAGCC 
CCACCGCAAC CCAGTGAAGG AGGGTATGGA TACGTGCAGA GCTTTGGACC CTATACGCTA 
GGGCCAGGTG AGGATGTGCG GATTGTGGTT GCTGAAGCGA TTGCCGGGCT GAATGATAAG 
CTGGCCTATG CCCTGGGGCG CTGGTATAAG CAGCAGGTTC GTCTGCAGGG ACAAGAAGTG 
GCGAATAACC TGCTATTCTA CTGGAATCCC ACAACCAACA CCTCCTGCAA TCAGGGCGAT 
CCGGGCTGTA TTGGCAGGAC CAAGAACGAC TGGGTCATGA CCGCCCGCGA CTCGCTCTTC 
AAACGCTTTG ACCAGATCCT CGAGGTCTGG AATAATGGGA TGCAGGTCCC GCAGGCTCCG 
AAGCCGCCGC GGCGATTTGT GGTAAGCTCC GGCACGGATC AGATTACCCT GGAGTGGGAA 
ACCTATGCAG GTGAGCCGGA TCCGGCAGGG TGGGAAATCT GGCGGGCGCA GAACTATTAC 
TTTGGCATCC CCCTGCCAGA TAGCTCCACT GTCTATAAGA AGATTGCCGA ACTGCCAGGG 
AATGCCCGTT CCTATATTGA TACCGAAGTG ACCCGTGGAG TCAACTACTT CTACTACATT 
CAGGCGGTCG GCAGCAATGG CTTGAAGAGC AATCGGTACT GGACACAGAC CTATCTGCCG 
GCCGTACTCC GGCGGCCGCC CGGAGCTTCG TTGGATGACG TACGGGTTGT CCCCAACCCC 
TATGTGTTGG AGGCCGATCT GGGCGTGCGC TTCCCGGATG TTCAGGATAA AATTGCCTTC 
TACGGGCTGC CACCACAGGC CACGATTCGG ATTTACACAG AGCTGGGTGA ACTTGTGACG 
GTGATTGAGC ACACGGACGG AAGTGGTGAC GAATTCTGGA ATCTGACCAC TTCGTCCCGT 
CAGGTGGTGG CCAGTGGGAT CTACTACGCT GTGATCACGG ACAAGGAAAC GGGCAAGCAG 
ACTACTCGGA CGATCGTGAT CATTCGCTGA 

 

Protein sequence

MIGAYWGHWR GLWISAKNWQ SPDGQTFPVR IEHIGPRFNG LGEYFQDVIK LVYKFDAPEI 
IVDGLTSFDK PAVPDEINPD IPADAMVENI AHTAMGIEVR RRVYQFSNEQ HQDYHIIEYV 
FTNTGNVDED EDIELPNQTL EDVYFTFFYR NKANAPAGAW DNSAGGAAWG KYTMNDALVP 
DWADMPGEQF SEQFAQGYDF WQDHAAQFSW LGHVPDQTNF NTIGNPMWFE LQPWIAHIGG 
DTTGRLGAAA MFGTLTVHAD RSASDESHDR AQPSMMDILD SDDADLTSRN DHNDINQMQF 
ERDWLEDGFK NGTGSARYSD EKPPHAWRIQ PDGDFARQTA PPQPSEGGYG YVQSFGPYTL 
GPGEDVRIVV AEAIAGLNDK LAYALGRWYK QQVRLQGQEV ANNLLFYWNP TTNTSCNQGD 
PGCIGRTKND WVMTARDSLF KRFDQILEVW NNGMQVPQAP KPPRRFVVSS GTDQITLEWE 
TYAGEPDPAG WEIWRAQNYY FGIPLPDSST VYKKIAELPG NARSYIDTEV TRGVNYFYYI 
QAVGSNGLKS NRYWTQTYLP AVLRRPPGAS LDDVRVVPNP YVLEADLGVR FPDVQDKIAF 
YGLPPQATIR IYTELGELVT VIEHTDGSGD EFWNLTTSSR QVVASGIYYA VITDKETGKQ 
TTRTIVIIR