Gene Rmar_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1729 
Symbol 
ID8568381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2004772 
End bp2005890 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content71% 
IMG OID 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_003291001 
Protein GI268317282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGAG CGCTGTGGTT GATCGGATTG CTTGTGCTGG GCGGCTGCCG CTCGCTGCAG 
GTGCCCGTCG GGGCCCTGGT GTCGCCGGAA GAAGCCACGT GGACGGTGCC TCCGCCGCTG
GTGGTACGCT GGCGGCGCGA CGTCGAGGCG GCCCCGGCAC GGGCGCTGGT GGCCGGGCGC
ATCCTGCTGG TGACCAACCA TAAAGGCGAC GTGCATGCCT TCGAATTGCC CGAAGGCCGG
CGGCGCGGCG TGCTCGATGT GGGCCGGGAT CTGATGGGCG TGCCGGCGCA CCGAAAGTCG
CTGCTGGTGG TGCCGGTGGT GCTCGACGAT GCCGCGGTGG TGGCCTACGA CCTGTACCGC
CGCCGGACCG TCTGGCGACG CACCGGCGAT GGCGCGGAGG CCGGTCCGGT GCTGGACGGC
GAGGTCGTGT ACGTGGCGGA GCGATGGGGC AGGGTGTACG CACTGAACGT GGAGGACGGC
CGGGAACGCT GGGTGCAGGA GCCCGAGGTG ACCGGGCTCG AGGGCGTGCG GGCGCGGCCG
GTGCGCGTCG GCGAACTGCT TGTGGTGGCC GATAAGCGCG GCCGTGTGGT GGCGCTGGAG
GTCCGAACAG GGCGACTGCG CTGGCAGCGG CAGCTCAGCC CTGTCTATGC CGACCTGGCC
GCCGTGGACG GGCGGGTGCT GGTGCCCACC ACCCGCGGGC GTCTGGTGGC GCTGGAGGCG
GCTTCGGGAG TAACGGCGTG GATGCTGGCG CTTCCCGACA CGTCCGTGCA CCTTACCACG
CCGGCCATGG CCGGATCGAC CGTGTACGTG GCCGGCGGCG ATGGCGTCGT TTGGGCGCTG
ATGCTGCGCA CGGGCATGGT GCGCTGGACG TGGACCGGTG GGGCCGCCAT CGTGGCGACT
CCGGTGGTCG ATACCACCGC CGGCGTGCTC TACGTGGGCG ACCTGCGCGG GCGCCTGGTG
GCGCTGGAGC TGACCAACGG CCGCCTGCGC TGGGAAACCC GACTGGAAGA CGGCGTGCTC
GAGTTGATCG GTTCACCTTT CGGTTTGATT GCGCTGACGC GCCCTCGCCA TGTGTACCTG
TTGCAGAGCG ATCATGAACC GGTGGCCTCT CGTCCTTAG
 
Protein sequence
MRRALWLIGL LVLGGCRSLQ VPVGALVSPE EATWTVPPPL VVRWRRDVEA APARALVAGR 
ILLVTNHKGD VHAFELPEGR RRGVLDVGRD LMGVPAHRKS LLVVPVVLDD AAVVAYDLYR
RRTVWRRTGD GAEAGPVLDG EVVYVAERWG RVYALNVEDG RERWVQEPEV TGLEGVRARP
VRVGELLVVA DKRGRVVALE VRTGRLRWQR QLSPVYADLA AVDGRVLVPT TRGRLVALEA
ASGVTAWMLA LPDTSVHLTT PAMAGSTVYV AGGDGVVWAL MLRTGMVRWT WTGGAAIVAT
PVVDTTAGVL YVGDLRGRLV ALELTNGRLR WETRLEDGVL ELIGSPFGLI ALTRPRHVYL
LQSDHEPVAS RP