Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1615 |
Symbol | |
ID | 8568267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 1869423 |
End bp | 1871333 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | putative CBS domain and cyclic nucleotide- regulated nucleotidyltransferase |
Protein accession | YP_003290889 |
Protein GI | 268317170 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGGTT CAACCATTCT GGAGCGATTG CGCGGGCTGC TCCGGGCAAC CCCGCCGTTC GATCAACTTT CGCCGGAAGA ACTGCAGGAT GTTCTGGCCG ATCTGACGCT GGAGTATTTC AAACCCGGCG AAATCATCGT CGAGCAGGGC AGTACGGCGC ACAAAGGCCT GTACGTGGTG GAGTCGGGGA TGGTCCGCCT CATGGACGTA ACCCGACAAC GCCTGGTGGA CAAATGTGGG GAGGGGGATA CCTTTGGCGC GTTCGGATTG ATCAAAGGCG GCGCGGCGCC TTACGAAGCG CGGGCGGTGG CTCCGACGGT CTGCGCGCTG ATCCGGGCTG AGCGGTTTCT GAAGCTCTAC GAGCAAAACG AGGCGGTGGC CACGTACTTC GACCGCCAGA TCAAACAGTA TCTGAACCGC CTGGGCACCG AGGTGGATGT GACGGGGGCG CGCCAGCTTT TCGGGCGGCG TCTGGGGCAA CTGGCCTACC GGCGATTGAT CACTTGCACT CCGGAGCATA CCGCGCAGGA AGTGGCCCGT CAGATGCTGC GCCGGGGGGT GAGTTCCGTT GTGGTGCTGC GCAACGGCCG GCTGGCCGGA CTGGTGACCG GTGCCGACCT GCGGCGCCTG GTGGCGCGTG GCGGCTCGCC GAACACGCCG GTGCGGCGCT TGATGAGCGC GCCGGTGCAG ACCATTGCGG CGAGCGCTAC GCTTTTCGAC GCCATGATGC AGATGCTTAC GCACGGCGTG CACCGACTGG TGGTCGTCGA TGCCGATGAG CGGCCGCTGG GCGTGCTCAC GGACCGAGAC GTGGCGCACT GGCGCGGGCA GGATCCGCTG GCCACCGTCA ACCGCATGGA AAGCGCCGCC AGCGTGGCCG ACCTGACCAA CATTCAGGAA GAAATCCACG AGCAACTGCT CCGCCTGCAG CGCCAGGGAG CGGCTCCGGA GCAACTGGGG CGTATGCTCT CGGTGGTGGG CGACCGGATT GCCCGCCGCG TCATTCGGCT GGCAGCGCGG GAGCTGCGCA CGCGTGAAGA TCTGGCCCGT CCGAATGTGG ACTGGGCCTG GTTGCGCCTG GGAGCCACCG GCCGGCAGGA GATGACCCTC ACCACCTACC AGCAGAATGC GCTGGTGTAC GCCGATCCCG GAGACGCCGA AGCGGCCGAA GCCGCCTCGT ACTGGTTTCG GCGCATGGCC GAGCAGGTCA ACCAGGCGCT CGAAGCCTGC GGCTTTCCGG CCAGCGAAAC CATCGCGCGG GAGGCGCGAT GGCGGCAACC GCTTGCGGGA TGGCGTCAGT CGATCCGCCA CTGGATTCTG CAGGCCGACG CGGCCGAGCT GGAGCGCGTG CTGCCCGTTT TCGACCTGCG GCCGCTGTGT GGCGAAGCGT CGCTGGTGCA GGCGCTCTGG CAGGAGGTGG AGGATGCGCT GAACATTCAG GAACTGGATC GCACGCGTCA GTTTTTCCGG CTGCTGGCCG AGTTAGCCCT GCGTCAGCGG CCGCCCCTGG CACCGCTGGG ACGCTGGGCG ACCGAACGGT CCGGTCCCGG CCGTGGACGC ATCGATCTGG AACGGCGTGG GACCCGGCTG GTGGTCGACG CTGCGCGTAT CCTGGCGCTG GAGCTTCGCT ATTTCGATTC GACCAACACG TTTGATCGCC TGCGCGTGGC GGCCGAGTCG CTCTCGGAGC TGGCCTCGGT GCTTCACGAT GCGATCGAGG CCTACCATTA CCTGATCGAT GTGCGTCTGG AGCACCAGCT GCGCCAGATG GAAGCAGGGG AGCCGCCGGA CAATTTCCTG AACCCCGAAG CGCTTTCCCG GGTGCAGCAG AAGCTGCTCC GCGAAGCGCT GGAGGCCGTC GGAGCCCTCC AACAGGCCCT GAAGCAGCGT TACCACGTTG CGGCGGGCTG A
|
Protein sequence | MAGSTILERL RGLLRATPPF DQLSPEELQD VLADLTLEYF KPGEIIVEQG STAHKGLYVV ESGMVRLMDV TRQRLVDKCG EGDTFGAFGL IKGGAAPYEA RAVAPTVCAL IRAERFLKLY EQNEAVATYF DRQIKQYLNR LGTEVDVTGA RQLFGRRLGQ LAYRRLITCT PEHTAQEVAR QMLRRGVSSV VVLRNGRLAG LVTGADLRRL VARGGSPNTP VRRLMSAPVQ TIAASATLFD AMMQMLTHGV HRLVVVDADE RPLGVLTDRD VAHWRGQDPL ATVNRMESAA SVADLTNIQE EIHEQLLRLQ RQGAAPEQLG RMLSVVGDRI ARRVIRLAAR ELRTREDLAR PNVDWAWLRL GATGRQEMTL TTYQQNALVY ADPGDAEAAE AASYWFRRMA EQVNQALEAC GFPASETIAR EARWRQPLAG WRQSIRHWIL QADAAELERV LPVFDLRPLC GEASLVQALW QEVEDALNIQ ELDRTRQFFR LLAELALRQR PPLAPLGRWA TERSGPGRGR IDLERRGTRL VVDAARILAL ELRYFDSTNT FDRLRVAAES LSELASVLHD AIEAYHYLID VRLEHQLRQM EAGEPPDNFL NPEALSRVQQ KLLREALEAV GALQQALKQR YHVAAG
|
| |