Gene Rmar_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1554 
Symbol 
ID8568206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1812095 
End bp1813303 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content69% 
IMG OID 
Productbeta-ketoadipyl CoA thiolase 
Protein accessionYP_003290829 
Protein GI268317110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGACG CCTATATCAT CGACGGCGTA CGGACGCCTA TCGGCCGCCT GGGCGGCGCC 
CTGGCCACCG TCCGGGCCGA CGACCTGGCC GCCCACGTGC TGCGTGCCCT GCTGGATCGC
CATCCTGAGA TCGACCCGGC CGCCATCGAC GACGTGTACA TGGGCTGCGC CAACCAGGCC
GGCGAAGACA ACCGCAACGT GGCCCGTATG GCGCTGCTGC TGGCCGACCT GCCGCCCAGC
GTGCCGGGTG TTACGATCAA CCGCCTCTGC GCCTCCGGCA TGAGCGCCGT CGTGGAGGCG
GCACGGGCCA TCCGGGCAGG CGACGGCGAT CTCTACCTGG CCGGCGGCAT CGAGCACATG
ACGCGTGCGC CCTTCGTGCT CTCCAAAGCC AGCCGCCCCT TCGGGCGCGA CGTCGAACTC
TACGACACCA GCCTGGGCTG GCGCTTCGTC AACCCCAGAA TGGAGGCCCG CTACGGCGCC
GAGCCCATGG GCTGCACCGC CGAAAACCTC GTGGAACTAT ACGACATCGC CCGTGAGGAC
CAGGATCTGT TCGCCTACCG CTCGCACAAA AAGGCAGCCG CCGCCCGCGA GCAAGGGCGC
TTCGCGCTGG AGATCGTGCC CGTCGAAGCC CCCCAGCACA AGGCACCGCC CCGGCTGGTA
AAAGACGACG AGCACATTCG CCCGGACACC ACGCTCGAAG CGCTCGCCAA GCTGCCGCCC
GTTTTCCGCA AAGGGGGCAC CGTGACGGCG GGCAACTCCT CCGGCCTCAA CGACGGCGCC
TGCGCGCTGC TGCTGGCCTC GGAGGAGGCC GTCCGTCGCT TCAACCTGAA GCCGAAGGCC
CGCATCGTCA GCTCGGCCGT CGTCGGTGTG GAGCCACGCA TCATGGGCAT CGGACCGGTC
GAAGCCGCCC GCCGCGCCCT CCGACGGGCC GGCCTGAGTT TCGACGATCT GGACGTTATC
GAACTCAACG AAGCCTTTGC CGCCCAGGTG CTGGCCTGCA CGCGGCAATG GGGACTGGCC
GACGACGACC CGCGCCTGAA TCCCAACGGC GGCGCCATCG CACTCGGCCA CCCGCTGGGC
ATGTCGGGCG CCCGGCTGAT CCTGACGGCC ACCGTCGAGC TGGAGCAACG ACAGGCCCGC
TACGCGCTCT GCACGCTCTG CGTGGGCGTC GGACAGGGTA TGGCGACCGT GATCGAACGT
GTGGCTTAA
 
Protein sequence
MRDAYIIDGV RTPIGRLGGA LATVRADDLA AHVLRALLDR HPEIDPAAID DVYMGCANQA 
GEDNRNVARM ALLLADLPPS VPGVTINRLC ASGMSAVVEA ARAIRAGDGD LYLAGGIEHM
TRAPFVLSKA SRPFGRDVEL YDTSLGWRFV NPRMEARYGA EPMGCTAENL VELYDIARED
QDLFAYRSHK KAAAAREQGR FALEIVPVEA PQHKAPPRLV KDDEHIRPDT TLEALAKLPP
VFRKGGTVTA GNSSGLNDGA CALLLASEEA VRRFNLKPKA RIVSSAVVGV EPRIMGIGPV
EAARRALRRA GLSFDDLDVI ELNEAFAAQV LACTRQWGLA DDDPRLNPNG GAIALGHPLG
MSGARLILTA TVELEQRQAR YALCTLCVGV GQGMATVIER VA