Gene Rmar_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1552 
Symbol 
ID8568204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1810379 
End bp1811575 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content66% 
IMG OID 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_003290827 
Protein GI268317108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAC CGCTCACCAC CGCCACGCCG ATCGGCGTCG TCGGTGCCGG CACCATGGGC 
CGCGGCATTG CCCAGGTGGC CGCCACCGTC GGCCATCCGG TGCTGCTTCA CGACAGTAAT
CCACGAGCGC TCGAAGACGC CCGCGCCTTC CTTACGCGCA TGCTGGGGCG CCTCGTAGAA
AAAGGAAAAC TAGCCCCCGG ACGGGACGCC GAAATCCTGG GCCGCATCAC GTTCCTGCAC
GACCAGCTGC AGCCACTGGC TTCCTGTGGA CTGATCATCG AAGCCATTGT CGAGGACCTC
GCGGCCAAAC AGGCCCTTTT TGCCCAGTTG GAACGCCTGG TGACGCCGGA AGCCATCCTG
GCCACCAACA CCTCGTCGCT CTCGGTGACG GCCATTGCCG CCGCCTGTCA GCGCCCGGAG
CGCGTGCTCG GGTTGCATTT TTTCAATCCG GCGCCCCTGA TGCCGCTCGT CGAGGTAGTG
CCCGGTGTGG CCACCGCCGC CGACGTGGTT GCCCAGGCCC GCGCGCTGAT GGAGATCTGG
GGCAAGTCGC CGGTTGTCGC CCGCGACACG CCGGGCTTCA TCGTCAACCG GGTGGCCCGC
CCGTTCTACG GCGAGGCGCT GCGCATCCTG GAAGAAGGCA TCGCCGACGT GCCCACCATC
GACTGGGCCA TGCGCACGAT CGGCGGCTTC CGGATGGGGC CCTTCGAACT GATGGACCTG
ATCGGCAACG ACGTCAACTT CCGGGTAACC GAAACGCTCT GGAAGGCTTT TTTCTACGAG
CCCCGCTACC GGCCTTCGTT CACCCAGCAG CGCATGGTCG AGGCGGGACG GCTGGGCCGC
AAGACCGGAC GCGGCTTCTA TGACTACAGG GAAGGTGCCA CCAACCCCGA ACCCACCACC
GATCCGGCCC TCGGCGAGCG CATTTTTCGG CGCATCCTGG CCATGCTGAT CAACGAAGCC
GTCGACGCCG TCTTCTGGCG CGTGGCCTCG CCGGCCGACA TTGACCGGGC CATGCAACTG
GGCGTAAACT ATCCGAAGGG CCTGCTGCAC TGGGCCGACG AGCTGGGCCT GGAAACCGTG
CTGGGCTGGA TGGAGACGCT CTATGAGACG TACCGGGAAG ACCGCTATCG CCCCAGCCCG
CTCTTTCGCC AGATGATCGA GCGGGGCGCT CGCTTTTTCG AGGAGGCTGC GTCCTGA
 
Protein sequence
MTQPLTTATP IGVVGAGTMG RGIAQVAATV GHPVLLHDSN PRALEDARAF LTRMLGRLVE 
KGKLAPGRDA EILGRITFLH DQLQPLASCG LIIEAIVEDL AAKQALFAQL ERLVTPEAIL
ATNTSSLSVT AIAAACQRPE RVLGLHFFNP APLMPLVEVV PGVATAADVV AQARALMEIW
GKSPVVARDT PGFIVNRVAR PFYGEALRIL EEGIADVPTI DWAMRTIGGF RMGPFELMDL
IGNDVNFRVT ETLWKAFFYE PRYRPSFTQQ RMVEAGRLGR KTGRGFYDYR EGATNPEPTT
DPALGERIFR RILAMLINEA VDAVFWRVAS PADIDRAMQL GVNYPKGLLH WADELGLETV
LGWMETLYET YREDRYRPSP LFRQMIERGA RFFEEAAS