Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1536 |
Symbol | |
ID | 8568188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1790168 |
End bp | 1791838 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | ABC-1 domain protein |
Protein accession | YP_003290811 |
Protein GI | 268317092 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCCTG CTGTTGCCAC GCGGGCGCGG CGGGCCCGCC AGATCGCCGA AGTGCTGCTC CGCCACGGCC TGGGCTATCT TGTGAGTATC TTCGGCCTGG AGCGCTTCGT GCCTTTGCAT CGGGGTCTGC TGGGCCATCC GCGCCGCCCC GAACCCTATG CCGCGCCCGA GCACCTGCGC ATGGCGCTCG AAGAGCTGGG CGCCGCCTGG ATCAAGCTCG GCCAGTTTCT GGCCACCCGC GCCGACCTGC TTCCCCCTTC CTACCAGCGC GAACTGGCCC GTCTGCAGGA TGCCGCCGCC CCCGTCCCGG GCGCGCAAAT CCAGGCCGTC ATCGAGGCCG AACTGGGACG CCCGGTCTCC GAGCTGTTCG CCCGCTTCGA GCCCGAACCA CTGGCCGCCG CCTCGATCGG CCAGGCCCAC GCGGCCACCC TGCCCGACGG CACCGAGGTG GTCGTCAAGG TGCGACGCCC CGGTGTCGTC GAACAGGTCG AGCAGGACCT GGAGCTGCTG CTGACCCTGG CCCACACCGC CAGCCGCCAC TGGGAACTGG CCGAAACCTA CGACATCGTG GGCATCGTGC AGGAATTCGC GCTGACGCTC CGAGCCGAAC TGGACTACCT GCGCGAAGGC CGCAATGCCG AACGCTTCGC CCATAACTTC GCCGGCAACC CGGCCGTCCA CATCCCCCGC GTGTTCTGGG AGTACACCAC CTCGCGCGTG CTCACCCTGG AGCGCATCCG GGGCATCAAG ATCGACAACC TGACCGCGCT CGACACCGCC GGCTTCGACC GCACCGAACT GGCCGGACGC GTGGCGCGCA TTCTGATGCA GATGGTCTTT GAGGACGGCT TTTTTCATGC CGATCCGCAC CCCGGCAACT TTTTCGTCGA GTCTGACGGC ACCATCGGAC TGATCGACTT CGGCATGGTC GGCGTCGTAG ACGGCCCCAC GCAGGATCGG CTGGCGCAAC TGCTGCTGGC GCTCGCACAG CAGGATCCGG ATCGGCTGGT GGACGCCTTC CTGGAGCTAG GTGTGGCCCG ACGGTATGTG GACCGCCTCG CGCTTCGCGA GGACCTGCGC CATTTCGTGC TGGCCTACTA CGACCGCCCG CTGCGTGAGC TGCGCCTGGA GCCGCTGCTG AAGGAAGCAC TGGCCATCGT TCGTCGCCAT CACCTGCACC TGCCCACCAA CCTGGTGCTG CTGGCGAAAA CCATCATGAT GGCCGAAGGG CTGGCCGCCC GGCTGGCCCC CGACTTTCAG GTGGCCACGC TATTGCCCGG CTACGTTCGC CGCCTGCTGT TGCACCGCTA CCTGCCGCTG CGGTGGATTC GCCGGTTGAG CTGGACAGGC CTTGAGGCGG CCGAGTTCGG GCTGGAGCTT CCGCGCCAGC TCCGGCGCCT GCTGCACGCG CTGGAGCAGG GCAACCTGCA ACTGGGCATG CGGCCCGAAG GCTTCGAGCC GCTCATCGCC CGGCTGGAGC GACTGACCAA CCGACTGGTG CTGGGCATGA TCACGGCCGC CTTCATCGTG GGCCTGGCCG TGCTGATGAC GGCGTTTCGC CTGCCCGGCA TCGAGCACCT GATCGGCCCG CTTTTCGGAC TGGGCTTTCT GCTGACCGCC CTGCTGGCCG CCTACCTGAT CTGGGTGATT CTGCGCTCCG GACGAATCTG A
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Protein sequence | MPPAVATRAR RARQIAEVLL RHGLGYLVSI FGLERFVPLH RGLLGHPRRP EPYAAPEHLR MALEELGAAW IKLGQFLATR ADLLPPSYQR ELARLQDAAA PVPGAQIQAV IEAELGRPVS ELFARFEPEP LAAASIGQAH AATLPDGTEV VVKVRRPGVV EQVEQDLELL LTLAHTASRH WELAETYDIV GIVQEFALTL RAELDYLREG RNAERFAHNF AGNPAVHIPR VFWEYTTSRV LTLERIRGIK IDNLTALDTA GFDRTELAGR VARILMQMVF EDGFFHADPH PGNFFVESDG TIGLIDFGMV GVVDGPTQDR LAQLLLALAQ QDPDRLVDAF LELGVARRYV DRLALREDLR HFVLAYYDRP LRELRLEPLL KEALAIVRRH HLHLPTNLVL LAKTIMMAEG LAARLAPDFQ VATLLPGYVR RLLLHRYLPL RWIRRLSWTG LEAAEFGLEL PRQLRRLLHA LEQGNLQLGM RPEGFEPLIA RLERLTNRLV LGMITAAFIV GLAVLMTAFR LPGIEHLIGP LFGLGFLLTA LLAAYLIWVI LRSGRI
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