| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1480 |
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| Symbol | |
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| ID | 8568131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | - |
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| Start bp | 1727316 |
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| End bp | 1728794 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | Arabinogalactan endo-1,4-beta-galactosidase |
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| Protein accession | YP_003290755 |
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| Protein GI | 268317036 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGGC CTCGTCGTAC GTGGCTGGCG CTCGGGCTGG TGTCGGTGCT GCTTGTAGGG
CACGGCACCG CCCGGGCGCA GGCCTTTTAT TTCGGACACG ACCTCTCCTA CGCGAACCAG
ATGGAGGATT GCGGGGCCAC GTTCAAAGAA GGGGGCGTCG AAAAAGACAT CTATCGGATT
TTCTCCGATC ACGGTACGAA CCTGGTCCGG CTCCGCCTCT GGGTCGACCC CACCTGGCAG
CGGCAGTTGC AGCAGCCGCC GGGCGTCAAG CCACAGTACA GCGATCTGGC CGACGTGCGG
GAGGCCATCG CCCGCGCGAA AGCGGCAGGT ATGCAGGTGC TGCTGGACTT TCACTACTCC
GACTTCTGGG CCGATCCCGG CCGACAGGTC ATTCCAGCCC GCTGGCGCTC GGTAGCCCAT
AACCTGGAGG CGCTGAAAGA CTCGGTCTAT GCCTACACCT ACGCGGTGCT GACCACGCTG
GACCGGGAAG GACTCATGCC CGAGATCGTC CAGGTCGGCA ACGAAAACAA CAGCGGAATC
CTGATTCACG CCGACATGGA CGAAAATTAC AACGGGATTA ATCCCGTTGA CTGGCGCTGG
TCGCGCCACG CGCAACTGTT CAATGCGGCC ATTCGGGCCG TGCGCGATGC CGGGGCCGCG
GGCTCGGTGA TGCCAAAGAT CGCACTCCAC TACGCCGGCC TGAACGGCAG CGTGCAGCAC
TTCCAGCGGC TGATCAGTCT GGGCGTGACC GACTTCGACA TCATGGGGCT TTCGTACTAT
TACGCCTTCC ACGGCGGGAG CATTGCCGAG CTGGGCGCTA CGATTCGGGA GCTGGTCGAC
CGCTTCCCGG ATTACCAGAT CATGGTGCTG GAAACCGCCT ACCCCTGGAC CTCGCGCAAC
TATGACGCAC TGGGCAATCT GCTCAACACG CAGGATCCCG ACTACTATCC GTTTTCGCCC
GAGATGCAGC GCACCTATAT GGTGGACCTG ACGCGCACGG TCATCCAGGC GGGCGGGAAG
GGAGTAGTGT TCTGGGAACC GGACTGGGTC TCGACGCCGT GCCGCACGCC CTGGGGGCAG
GGCTCTTCCT TCGAGCACGT GGCCTTCTTC GAACCGGGCA CCTATAACCT GATTGCCAAC
GGTGGGATTG GCTGGACGCA CCGCGAGTGG TACGCCGATC TGCTGACAAC TGGCGAGGCC
ATCACGCCCG AGACGCCGGT GCTGCTGGAA GCCGTCTATC CCGTGCCCTT TCGAAATCGC
CTCACCGTAA CGTATCGGCT GGTCCGACCG CAGCAGGTTA CCGTACAGGT GCTCGATGTA
CTGGGACGCA TTGTAGCCAC GTTGAGTACG GGGCGGCAAC CGGCCGGCCT GCACCGCCTT
TTCTGGCAAC CCGCAGCGCT CCCGACCGGA CGCTACCTGC TCCGCGTGCA GACGTCGGAC
CGTACGGAAA GCCGCTGGCT GTTTTACATC CCCGAATAG
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| Protein sequence | MQRPRRTWLA LGLVSVLLVG HGTARAQAFY FGHDLSYANQ MEDCGATFKE GGVEKDIYRI
FSDHGTNLVR LRLWVDPTWQ RQLQQPPGVK PQYSDLADVR EAIARAKAAG MQVLLDFHYS
DFWADPGRQV IPARWRSVAH NLEALKDSVY AYTYAVLTTL DREGLMPEIV QVGNENNSGI
LIHADMDENY NGINPVDWRW SRHAQLFNAA IRAVRDAGAA GSVMPKIALH YAGLNGSVQH
FQRLISLGVT DFDIMGLSYY YAFHGGSIAE LGATIRELVD RFPDYQIMVL ETAYPWTSRN
YDALGNLLNT QDPDYYPFSP EMQRTYMVDL TRTVIQAGGK GVVFWEPDWV STPCRTPWGQ
GSSFEHVAFF EPGTYNLIAN GGIGWTHREW YADLLTTGEA ITPETPVLLE AVYPVPFRNR
LTVTYRLVRP QQVTVQVLDV LGRIVATLST GRQPAGLHRL FWQPAALPTG RYLLRVQTSD
RTESRWLFYI PE
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