Gene Rmar_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1360 
Symbol 
ID8568010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp1593249 
End bp1593935 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content62% 
IMG OID 
Productprotein of unknown function DUF71 ATP-binding region 
Protein accessionYP_003290637 
Protein GI268316918 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGC CCGTTCTTGT CTCCTGGAGT GGTGGCAAAG ACAGCGCCCT GGCGCTTTAT 
CGAATCCTGC ACGATCCGAA CTGGCACGTG GTCGGATTGC TGTGCACGAT CAGTCAGCCT 
TACGACCGGA TCACCATGCA CGGCGTCCGG CGCGTGTTGC TCGAACAACA GGTAGCCGCC 
ATGAATGTGG CGCCGATGAT TCCGATTTTT CTACCGCGTG ATGCCTCGAA CGAAGTGTAC 
GAAGCGGCCT GGGCGAAAGC GCTGCGTCCG TTCATTGCGC GGGGTGTCCG GCACGTGGCG 
TTCGGCGACA TTTTTCTGGA AGACATCCGC GCCTACCGGG AGCAGCAGCT GGCAAAGCTG 
GACATGACGC CGGTTTTTCC GATCTGGACC GGTAGCCGTA GGCGTTCCGA CAGTCTGGCA 
CTGTTGGACG AATTCTGGAA CGCGGGCTTC CGCACGCGCA TCGTGTGCCT CGATGCACGA 
CACCTCGGAC CGGAATGGGC CGGCCGCGAG CTGACCCCGG AGGCGATGCA AGAGCTACCG 
GAAGCCGTTG ATCCCTGCGG CGAACACGGC GAATTCCACA CGTTCGTCTT CGACGGGCCA 
CTGTTCCGGC ACCCTGTCCG CCATCGGCTC GGCCGACGCG TCACCCGCCG GGGCTTTCAT 
TTTCGCGATC TGATTCCTCT TCCATGA
 
Protein sequence
MKTPVLVSWS GGKDSALALY RILHDPNWHV VGLLCTISQP YDRITMHGVR RVLLEQQVAA 
MNVAPMIPIF LPRDASNEVY EAAWAKALRP FIARGVRHVA FGDIFLEDIR AYREQQLAKL 
DMTPVFPIWT GSRRRSDSLA LLDEFWNAGF RTRIVCLDAR HLGPEWAGRE LTPEAMQELP 
EAVDPCGEHG EFHTFVFDGP LFRHPVRHRL GRRVTRRGFH FRDLIPLP