Gene Rmar_1301 details

Gene Information

• Locus tag: Rmar_1301
• ID: 8567951
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 1524112
• End bp: 1526193
• Gene Length: 2082 bp
• Protein Length: 693 aa
• Translation table: 11
• GC content: 68%
• Product: sodium/hydrogen exchanger
• Protein accession: YP_003290579
• Protein GI: 268316860

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCTGG CGGCAGGCCT GCAATTGCCC TTTCTGGGCG AACTGGTGAC GCTGCTCGGG 
GCCGGCACGG CCATCGCCTA CCTCTGCTAT CGGCTTCGGC TGGAGCCGGT GGTGGGCTTT 
CTGCTGGCAG GCGTGCTGGT CGGCCCCGGC GGCATCGGTC TGGTACAGAA CGAAACGCTT 
ATCGGCCGCA TGGCCGAAAT CGGCGTTATT CTGCTGCTAT TCTCGATCGG CGTCGAATTC 
AGTCTGGAGA AACTGGCACG TCTGAGCCGT CTGGTGCTGG GCGGCGGTCT GCTGCAGATG 
GGCGCTACGA CGGCGCTGGT TGCCCTGCTG TTGCACCTGC TGGGGACGAC CTGGCCTGTC 
GCCATTTTCA CGGGCACGCT GGTGGCACTC AGCAGCACGG CGCTCGTCAT GGGTCTGCTG 
GCCGAGCGCG GCGAAACCGG AAGCGCGGCC GGACAGGCCA GCCTGGCCAT CCTGATCTTT 
CAGGACCTGG CCGCCGTCGG GCTGGTGTTG CTCGTGCCGC TCATGGGCGG CGCGGGCGGC 
TCCGCCGCGG ACGTACTCTT CACCCTGGTC AAAGCCCTGC TCATCATCGG CGTGGTGCTC 
GTGCTGGCGC GCCTGCTCAT TCCCCGGTTG CTCGACTACG TGGCCCGCAC CTATCGACAC 
GAACTGTTTC TGCTGACCGT GGTCACGCTC TGCTTCGGGA CGGCGTTCGT GACCGGGCTG 
TTCGGCATCA GCCTGGCCCT GGGCGCCTTT CTGGCCGGGC TGGTCGTCAG CGAGAGCCCC 
TACGCCGAGC ACACGCTCAG TGAGATCCTG CCGCTGCGCA CGGTCTTCAA TGCCATGTTC 
TTCATGTCGG TGGGCATGTT GCTGGACGTG CGTTTCGTGC TGGCCCATCC CTGGCTGGTG 
CTTGGCATTG CCCTGTTCAT TGCCCTGCTG AAAGCGCTGG TGACGGGCGG TAGCGTGCTG 
GCTCTTGGCT ACGGACCGCG CGTGGCGGCC GTGGTCGGAC TCGGGCTTGC GCAGATCGGA 
GAGTTTTCCT TCGTCCTGGA ACGGCTGGGT CGCGAAGTGG GCCTGCAGCC GCTGGGACGT 
CCGGACGGCG ACGCATTATT CATCGCCTCG GCGGTGCTGT TGATGCTGGC CACCCCGCTG 
CTGCTCCCGG CCGGACATCG GCTGGGACGT TGGCTGGAAG CGCGCTGGCC CGTCCGGTTG 
CCGGCCGAAC TGGCCACCGA CGGTCAGGAG GCCACGCTGG AAGACCACCT GATTCTGGTC 
GGCTACGGCC GCGACGGGCA GCACCTGGCC TGGATGCTGA GGCCGCTGCA GCTGCCCATG 
CTGGTCATCG ATCTGGACCC GCACCGCGTG CTGGAAGCCC GCGAGGCCGG TCTGCCCACG 
CTGCTGGGCG ATGCCAGTCG CCGCGCCATT CTGGAGGCCG CCGGCATCCG CCGGGCCAAA 
GCGCTCGTGG TTCTCATCGA CGACCGGGCC GCGGCCGAAC GCCTGGTGCG GCTGGCACAC 
TATCTGAACC CGACGCTGCG TATCATTGCA CGCGCCGGCC TGCTCCGCGA CGTCGATACG 
CTTCGTGAGG CCGGTGCCGA TCTGGTCGTG CCCGAAGAAC TGGAAACCCC GCTGCGGCTC 
TTCTCGCACG TGCTCGACGC CTACGGTCTC TCGGCCGAGG AGGTGGCCGC CGAGATCCAG 
GCGCTCCGAG CCGAAAACTA TCAGGCCTTC CGCCACCCGG AGCAGGTCAA GCACGTGCTT 
TCGGCGCTGA CGCAGGACCA GTTGCACACG CGCGAAGTGA CCGTACATGC CAGCGCGCCG 
GCCGTCGGGC GCACGCTTTC CGAGCTGGCG CTGCGTCCAC GTTACGGCAT CACCGTGCTG 
GCCGCCTACC GCGACGGCCG CCTCATTCCC AGCCCGGGCG GCGACTTCCG GGTACGGCCC 
GGCGACCGGC TGGTGCTGGT CGGCCCGGCC CAGGCGTTCG TGGCCTGCAG TTCGCTGTTC 
CGCACCCCGC TCAGCGCACA CCACGCGCGG CAGCTCGGCT TCTCCGAAGA AGAGACGGCC 
GAACTGGAAA AGGTGGAGCC GCCCGCTCAG CCTTCCCGGT AG 

 

Protein sequence

MLLAAGLQLP FLGELVTLLG AGTAIAYLCY RLRLEPVVGF LLAGVLVGPG GIGLVQNETL 
IGRMAEIGVI LLLFSIGVEF SLEKLARLSR LVLGGGLLQM GATTALVALL LHLLGTTWPV 
AIFTGTLVAL SSTALVMGLL AERGETGSAA GQASLAILIF QDLAAVGLVL LVPLMGGAGG 
SAADVLFTLV KALLIIGVVL VLARLLIPRL LDYVARTYRH ELFLLTVVTL CFGTAFVTGL 
FGISLALGAF LAGLVVSESP YAEHTLSEIL PLRTVFNAMF FMSVGMLLDV RFVLAHPWLV 
LGIALFIALL KALVTGGSVL ALGYGPRVAA VVGLGLAQIG EFSFVLERLG REVGLQPLGR 
PDGDALFIAS AVLLMLATPL LLPAGHRLGR WLEARWPVRL PAELATDGQE ATLEDHLILV 
GYGRDGQHLA WMLRPLQLPM LVIDLDPHRV LEAREAGLPT LLGDASRRAI LEAAGIRRAK 
ALVVLIDDRA AAERLVRLAH YLNPTLRIIA RAGLLRDVDT LREAGADLVV PEELETPLRL 
FSHVLDAYGL SAEEVAAEIQ ALRAENYQAF RHPEQVKHVL SALTQDQLHT REVTVHASAP 
AVGRTLSELA LRPRYGITVL AAYRDGRLIP SPGGDFRVRP GDRLVLVGPA QAFVACSSLF 
RTPLSAHHAR QLGFSEEETA ELEKVEPPAQ PSR