Gene Rmar_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1280 
Symbol 
ID8567930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1501302 
End bp1502741 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content68% 
IMG OID 
ProductCHRD domain containing protein 
Protein accessionYP_003290558 
Protein GI268316839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACGC GCTACGCCCT GGGAGCCTGG CTGCTCCTGT TTGCCCTGCC CGTCCATGCC 
CAGACCTTCT TTTCGGCCGT GCTTACCCCG GAACAGGAAA CCGGCACGGT CACCAGCAAC
GGACGCGGCA CAGCCGCACT GGCCCTGACC GACGAAGGCC TGCAGTTCGT CATCACCATT
GATGGCCTGA CGGGCCCCGT TCAGGCGGCC CACTTTCACC AGGCCGCCCC CGGCGCCGAC
GGACCGGTGG TCCGCGCCAT CACGTTCGAA GGCAACACGG CCACGGGCAT CTGGACGGCC
GCCGACGCCC AGCCGCTGAC CGACGAGCTG ATCACGGCGT TGCTGCTCGG CCAGCTCTAC
ATCAACATCC ACACGAGCCA GTATCCGGGC GGCGAAATCC GCGGCCAAGT GCGGCTCAGC
GGCGGCACCG CCCTGCATGC CGACCTCACG CCCGAGCAGG AAACCGACGC CGTCACCAGC
AACGGACAGG GCACGGCCCA CCTGACACTC ACCGAGGCCG GTCTGGTCTA TCAGATTTCG
GTAGAAGGGT TGACCGGCCC GATCCAGGCC GCCCACTTCC ACTACGGCGC GGCCGGCGTC
AGCGGTCCCG TGGTGCACGC CATTACCTTC GAGGGCAATA CCGCCGCCGG CGTCTGGACC
GACCTCCCCG ACTCGCTCAT CATGGCGCTA TTGCTCGGCC AGCTCTACCT GAACGTACAC
ACCGCCCAGT ATCCGGCCGG CGAAATCCGC GGACAGGTGC AACTGGCCGG CGGCACCGGG
GCCGTCGTGT CGCTCGATCC CATGCAGGAA ACCGGCACGG TCACCAGCAA CGGACGCGGC
ACGGCGTTTC TGGCGCTGAC CGAAGCCGGA CTGGTCTACC ACCTCACGGT TACCGGGCTG
ACGGGCGCCG TCCAGGCTGC TCACTTTCAT CAGGCGCCTG CCGGCCAGGA CGGCCCCGTC
GTCCGGACCA TCCCGCTCGA GGGCAACACG GCCTCCGGCG TCTGGCGCCC GAGCGACGAC
GAGCCGCTGA CCGACGAACT GATCCGGGAG TTGCTGGCCG GCAACATCTA CATCAACATC
CACACCGCCC AGTATCCGGC CGGGGAGATT CGGGGACAGG TTCGTCCGGG CCAGCTCGTA
CTGACCGCCC TGGAATCGCT CGAAGGCGAA CCGCCAGCCA CCCTGACGCT CGCGCCGAAC
TACCCGAATC CGTTCCGCGA CCGCACCACC ATCACGTTCG CGCTCCCGCA GGCCGGCCGG
GCCACATTGG CCGTCTACAA CCTGCTGGGC CAGCGCGTGG CGACGCTGGT AGATGGCTTC
CTGCCGGCCG GCCGCTACCA GATCGTGTTC GACGCCGCCA CGCTTCCGGC TGGCCTCTAC
CAGTACCGAC TCGAAACGCC CTACGGAAAC CAGAGCCGCA CGCTCATGCA TCTGCGCTGA
 
Protein sequence
MRTRYALGAW LLLFALPVHA QTFFSAVLTP EQETGTVTSN GRGTAALALT DEGLQFVITI 
DGLTGPVQAA HFHQAAPGAD GPVVRAITFE GNTATGIWTA ADAQPLTDEL ITALLLGQLY
INIHTSQYPG GEIRGQVRLS GGTALHADLT PEQETDAVTS NGQGTAHLTL TEAGLVYQIS
VEGLTGPIQA AHFHYGAAGV SGPVVHAITF EGNTAAGVWT DLPDSLIMAL LLGQLYLNVH
TAQYPAGEIR GQVQLAGGTG AVVSLDPMQE TGTVTSNGRG TAFLALTEAG LVYHLTVTGL
TGAVQAAHFH QAPAGQDGPV VRTIPLEGNT ASGVWRPSDD EPLTDELIRE LLAGNIYINI
HTAQYPAGEI RGQVRPGQLV LTALESLEGE PPATLTLAPN YPNPFRDRTT ITFALPQAGR
ATLAVYNLLG QRVATLVDGF LPAGRYQIVF DAATLPAGLY QYRLETPYGN QSRTLMHLR