Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1280 |
Symbol | |
ID | 8567930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 1501302 |
End bp | 1502741 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | CHRD domain containing protein |
Protein accession | YP_003290558 |
Protein GI | 268316839 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCACGC GCTACGCCCT GGGAGCCTGG CTGCTCCTGT TTGCCCTGCC CGTCCATGCC CAGACCTTCT TTTCGGCCGT GCTTACCCCG GAACAGGAAA CCGGCACGGT CACCAGCAAC GGACGCGGCA CAGCCGCACT GGCCCTGACC GACGAAGGCC TGCAGTTCGT CATCACCATT GATGGCCTGA CGGGCCCCGT TCAGGCGGCC CACTTTCACC AGGCCGCCCC CGGCGCCGAC GGACCGGTGG TCCGCGCCAT CACGTTCGAA GGCAACACGG CCACGGGCAT CTGGACGGCC GCCGACGCCC AGCCGCTGAC CGACGAGCTG ATCACGGCGT TGCTGCTCGG CCAGCTCTAC ATCAACATCC ACACGAGCCA GTATCCGGGC GGCGAAATCC GCGGCCAAGT GCGGCTCAGC GGCGGCACCG CCCTGCATGC CGACCTCACG CCCGAGCAGG AAACCGACGC CGTCACCAGC AACGGACAGG GCACGGCCCA CCTGACACTC ACCGAGGCCG GTCTGGTCTA TCAGATTTCG GTAGAAGGGT TGACCGGCCC GATCCAGGCC GCCCACTTCC ACTACGGCGC GGCCGGCGTC AGCGGTCCCG TGGTGCACGC CATTACCTTC GAGGGCAATA CCGCCGCCGG CGTCTGGACC GACCTCCCCG ACTCGCTCAT CATGGCGCTA TTGCTCGGCC AGCTCTACCT GAACGTACAC ACCGCCCAGT ATCCGGCCGG CGAAATCCGC GGACAGGTGC AACTGGCCGG CGGCACCGGG GCCGTCGTGT CGCTCGATCC CATGCAGGAA ACCGGCACGG TCACCAGCAA CGGACGCGGC ACGGCGTTTC TGGCGCTGAC CGAAGCCGGA CTGGTCTACC ACCTCACGGT TACCGGGCTG ACGGGCGCCG TCCAGGCTGC TCACTTTCAT CAGGCGCCTG CCGGCCAGGA CGGCCCCGTC GTCCGGACCA TCCCGCTCGA GGGCAACACG GCCTCCGGCG TCTGGCGCCC GAGCGACGAC GAGCCGCTGA CCGACGAACT GATCCGGGAG TTGCTGGCCG GCAACATCTA CATCAACATC CACACCGCCC AGTATCCGGC CGGGGAGATT CGGGGACAGG TTCGTCCGGG CCAGCTCGTA CTGACCGCCC TGGAATCGCT CGAAGGCGAA CCGCCAGCCA CCCTGACGCT CGCGCCGAAC TACCCGAATC CGTTCCGCGA CCGCACCACC ATCACGTTCG CGCTCCCGCA GGCCGGCCGG GCCACATTGG CCGTCTACAA CCTGCTGGGC CAGCGCGTGG CGACGCTGGT AGATGGCTTC CTGCCGGCCG GCCGCTACCA GATCGTGTTC GACGCCGCCA CGCTTCCGGC TGGCCTCTAC CAGTACCGAC TCGAAACGCC CTACGGAAAC CAGAGCCGCA CGCTCATGCA TCTGCGCTGA
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Protein sequence | MRTRYALGAW LLLFALPVHA QTFFSAVLTP EQETGTVTSN GRGTAALALT DEGLQFVITI DGLTGPVQAA HFHQAAPGAD GPVVRAITFE GNTATGIWTA ADAQPLTDEL ITALLLGQLY INIHTSQYPG GEIRGQVRLS GGTALHADLT PEQETDAVTS NGQGTAHLTL TEAGLVYQIS VEGLTGPIQA AHFHYGAAGV SGPVVHAITF EGNTAAGVWT DLPDSLIMAL LLGQLYLNVH TAQYPAGEIR GQVQLAGGTG AVVSLDPMQE TGTVTSNGRG TAFLALTEAG LVYHLTVTGL TGAVQAAHFH QAPAGQDGPV VRTIPLEGNT ASGVWRPSDD EPLTDELIRE LLAGNIYINI HTAQYPAGEI RGQVRPGQLV LTALESLEGE PPATLTLAPN YPNPFRDRTT ITFALPQAGR ATLAVYNLLG QRVATLVDGF LPAGRYQIVF DAATLPAGLY QYRLETPYGN QSRTLMHLR
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