Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1260 |
Symbol | |
ID | 8567909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1475403 |
End bp | 1479938 |
Gene Length | 4536 bp |
Protein Length | 1511 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | Glutamate synthase (ferredoxin) |
Protein accession | YP_003290538 |
Protein GI | 268316819 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.179185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTGC AGAACCAGAA CCCTGATTCT CATCACCGCT CGCTGTTTAG CGCTCAGGAG CAAGACGCCT GTGGCGTCGG TCTGATCTGT ACGCTGACGG ATGCCCCTTC CCACACCATT GTGCAGGACG GCCTGCAGGT GCTGCTGCGC CTGAGCCATC GTGGTGCCTG CGGTTGCGAC GAGCGCACGG GCGACGGGGC GGGCATCCTT GTGCAACTCC CAGATCTGTT CCTCCGGGAG GTGGCCCTGG AGGAGGGCGT TCGGCTGCCC GAACCCGGCG CCTACGCGGT GGGCATGCTC TTTCTGCCGA AAGATCGCGC GCGCCAGCAG GCCGGCCGGG AGGCCTTTGA GGGACTGGTG CAGGCCGAGG GGCAGCAGGT GCTGGGCTGG CGTCGTGTGC CCACGCGCCC CGAAGTGCTG GGTGTGTCGG CGGCCGCCGT CGAGCCGGCC GTCTGGCAGG TGTTCGTGCA GGCGGGCCCG GGGCTCGACG TGGAGGCCTT CGAGCGCAAG CTGTTTGTGA TCAAGCGTCG GGCCCGGCAT GTTATCGACG ACCCGGACTT CTACGTGGTC AGCCTGTCGG CGCGCACGCT GGTCTACAAG GGCATGCTCA TGCCCGATCA GTTGGGCGTC TATTACCCGG ACCTGACCGA CCCGCGTTTT GCCAGCCGAT TGGCTCTGGT GCACTCGCGT TTCAGCACGA ACACCTGGCC GCGCTGGCCG CTGGCCCAGC CCTTCCATCT ACTGGCGCAC AACGGCGAAA TCAACACGCT GCGGGGTAAC ATCAATGCGC TACGGGCGCG CGAGGCGCTG TTGCGCTCGG AACTGCTGGG CGACGATCTG GCCAAGGTGC TGCCGCTGCT CGACGAATCG GGCAGCGACT CGCAGATGCT CGACGCCATG ATCGAGCTGC TCTACCGGGC CGGTCGTTCG CTCCCGCACG CCATTCTGAT GACCATTCCG GAGGCCTGGG CGCACGACGA CTATATGGAC GACGCGCGCA AGGCCTTCTA CGAATACCAC GCCTGCCTGA TGGAGCCCTG GGACGGTCCG GCCGCCGTCT GCTTCACCGA CGGTCGCTAC GCCGGGGCCG TGCTCGACCG CAACGGGCTG CGCCCGGCCC GCTACACGAT CACCCGCGAC GGGCTCGTCG TGCTGGCCTC CGAAGTGGGT GTGCTCGATC TGGAGCCCGA ACGCGTCGTC GAAAAAGGCC GGTTGCAGCC CGGACGCATG TTCCTGGTGG ACCTGGAGGA AGGCCGGGTT GTGCGGGATG AGGAGATCAA AGCCACGCTG AGTCGTCGCC GGCCCTATCG TCTCTGGCTC CGGTCGCACC TGCGCACCGA AGCGGATCTG CCCCGGGCCC AGGCCCTGCC GCGGACCTCG GATCTGGAAT CGCTGCGGCG CCAGCAGCGG CTCTTTGGCT ACTCGCTCGA GGAGCTGCGC ATGATCCTGG CGCCCATGGC GCAGAAGAAG GATGATCCCG TCGGGTCCAT GGGCGACGAC ACGCCGCTGG CCGTGCTGTC GGACTTTCCG CGGCTGACCT ACGACTACTT CAAGCAGCTC TTCGCGCAGG TGACCAACCC GCCCATCGAC GCCATCCGCG AAGAGCTGGT TACCTCGCTG CATACGTATC TGGGCGGCGA GGCCAACCTG TTGGACGAAA CGCCCGAACA GGCGCACCGG CTGCGTCTGG AGCATCCGGT GCTGACCCCG GAAAAACTGG CCCGTATCAA GGCGCTGGAC GAAGAGAACC TGCGGGCCAC CACGCTCAGC ACCACGTTCG ACGTCAAAGC CGGCGGTGAA GGCCTGGTGG CCGCGCTGGA CGAACTGTGT TGGCAGGCCG CCGAGGCCGT GCAGCAGGGC TTCACCATCC TGGTGCTCTC GGATCGGGAA GCAGGTCCGG GACGGGCACC CATTCCGGCC GCGCTGGCCG TAGGAGCCGT GCATCACCAC TTGATCCGCA CGGGGTTGCG GGCCCGCTGC AGCCTGGTGG TCGATAGCGG CGAGCCGCGC CAGGTGCACC ACCTCTGCGT GCTGGTCGGC TATGGTGCCG ACGCCGTGTG TCCCTATCTG GCCCTGGAAA CCGTGGCCGA CCTGGTGCGC ATGGGCGAGA TCACCGGGTT GCACGTCCAG GAAGCCCAGC AGCGCTACAT CAAGGCGCTC TGCAAGGGGC TGCTCAAGGT GATGTCGAAG ATGGGCATTT CGGTATTTCA GAGCTACCGG GGCGCCCAGA TCTTCGAAAT CGTGGGCCTG AGCGAGGAGG TGGTCGAGCG CTGCTTTGCC CGGACCGTTT CCCGGCTGGG CGGTGTGGGC TTCGACGTGC TGGCCGAGGA GGTGCGCCTG CGCTACGAGC AGGCCTATCC GGAGGTGCCG GTTGCCGGCG CACCGAAGGA CGAGCTGGAG CGCGGCGGTT TCTACCAGTG GCGGCGCGGC GGCGAGCATC ACCGCTACAA CCCGCTGACG GTGGCCAAAC TGCAGCACGC CGTCCGCGAA CGCGATCCGA AAGACTATGA GGAATTCGCC CGCCTGGTCA ACGACGAGAG TCGGCGGCTG TGCAAACTGC GTGGCCTGCT GGACTTCGTC CCGGCCGAGC GCCCGATCCC GCTCGAAGAG GTCGAGCCCT GGACGTCCAT CGTGCGCCGC TTCAAGACGG GCGCCATGTC CTTCGGCTCG ATCAGCAGGG AAGCGCACGA GGTGCTGGCC GAGGCAATGA ACCGCATCGG GGGGAAGAGC AACACGGGCG AAGGCGGCGA AGAACCGGAG CGTTACGCCC GGGACAACCC GAAACGAAGC GCCATCAAGC AGGTGGCCTC CGGACGCTTC GGCGTAACGA TCGGTTATCT GGCCAGCGCC GACGAAATCC AGATCAAGAT GGCCCAGGGG GCCAAGCCGG GCGAGGGCGG ACAGCTCCCG GGCGAGAAGG TCTATCCCTG GATCGCCCGC GTGCGGCATT CGACCCCGTG GGTAGGCCTG ATCTCGCCGC CACCGCATCA CGACATCTAC TCGATCGAAG ACCTGGCCCA GCTCATCTAT GACCTCAAGC AGGCCAATCC CACTGCCCGT ATCAGCGTGA AGCTGGTGGC CGAGGCGGGC GTGGGCACCA TTGCAGCGGG CGTGGCGAAG GGCGGGGCCG ACGTCATCCT GATCAGCGGA CATGACGGCG GCACCGGCGC CTCGCCGATC ACCTCGATCC TGCACGCCGG TCTGCCCTGG GAGCTGGGGC TGAGCGAGAC ACATCAGGCG CTGGTGGCCA ACGGCCTGCG TGAGCGGGTC GTCGTGGAGG TGGACGGTCA GCTTCAGACC GGACGCGACG TGGCCATCGC GGCCCTGCTG GGCGCCCAGG AGTTTGGCTT CGCTACGGCC CCCCTGGTGG CGATAGGGTG CATCCGCATG CGCAAATGCC ACCTGAACAC GTGCCCGGTG GGCATCGCCA CCCAGGATCC GGAGCTGCGC AAGAAGTTCA CGGGCCAGCC GGAGCACGTG ATCAACTACT TCTATTTCGT GGCCGAAGAG CTGCGCCAGA TCATGGCGCA ACTGGGCTTC CGGACGGTCG AGGAAATGGT CGGGCGCGTC GATCGGCTGC GCATCCGGTC GACCGACCAC TGGAAGGCCC GCTACCTGGA TCTGCGGCCG CTGATCAAAA AAGTCGAAAC ACCGGAGATT CTGCGGCCCT TCAGCCAGAA GCCGCCCGCG CGCCGCGACG TGCCCACGCT CGACGAGCGT GTCCTGCCAC GCCTGAAGCC TGCGCTGGAG CGCCGCGAGC CGGTGCGGCT GCACGTGGCC ATCCGCAACA CGGACCGCAC CGTCGGTGCC CGCATCAGCT ACGAAATTGC CACGCGCTAC GGGGAAAGCG GCCTTCCGGA AGACACGATC TGGCTCGACT GCGAAGGCTC GGCCGGACAG AGCTTCGGGG CGTTCCTGGC GCCGGGCGTG ACGCTGCGGG TCATCGGCGA GGCCAACGAC TACTTCGGCA AAGGCCTCTC CGGCGGTAAG CTCATCATTC ATCCGCCGGA AAACGCCGCC TATCCGGCCG AGTCGAACAT CATCATCGGC AACGTGGCAC TCTACGGGGC CACTTCCGGC GAGGCTTACA TCCGCGGCCG GGCCGGCGAG CGCTTCGCCG TGCGCAACAG CGGCGCCCGG GCCGTGGTCG AGGGTGTGGG CGACCATGGC TGCGAGTACA TGACCGGCGG GCGCGTGGTG GTGCTGGGCC CCACGGGTCG CAACTTCGCG GCCGGCATGA GCGGCGGCAT CGCCTACGTG CTGGACGTGG ACGGCCTGTT CGCCGAGCGC CACTGCAACC TGGACATGGT CGAGCTGATG CCGGTGGTCG AGGAGGCGGA CATTGCCGAG CTGCGCGAGC TGATCGAACG CCATTACGCC TACACGGGCA GCCCGGTGGC CCGCTGGGTG CTGGAAGACT GGCCGAACAT CCTGGCCCGC TTCGTGAAGG TCTTCCCGAT CGACTACCGG AAGGCGCTCG AGCGGCTGGC CCGGGAGCAG GAAGAAGCGA ACCTGCGGCA ACATCTGGCC GCCTGA
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Protein sequence | MRLQNQNPDS HHRSLFSAQE QDACGVGLIC TLTDAPSHTI VQDGLQVLLR LSHRGACGCD ERTGDGAGIL VQLPDLFLRE VALEEGVRLP EPGAYAVGML FLPKDRARQQ AGREAFEGLV QAEGQQVLGW RRVPTRPEVL GVSAAAVEPA VWQVFVQAGP GLDVEAFERK LFVIKRRARH VIDDPDFYVV SLSARTLVYK GMLMPDQLGV YYPDLTDPRF ASRLALVHSR FSTNTWPRWP LAQPFHLLAH NGEINTLRGN INALRAREAL LRSELLGDDL AKVLPLLDES GSDSQMLDAM IELLYRAGRS LPHAILMTIP EAWAHDDYMD DARKAFYEYH ACLMEPWDGP AAVCFTDGRY AGAVLDRNGL RPARYTITRD GLVVLASEVG VLDLEPERVV EKGRLQPGRM FLVDLEEGRV VRDEEIKATL SRRRPYRLWL RSHLRTEADL PRAQALPRTS DLESLRRQQR LFGYSLEELR MILAPMAQKK DDPVGSMGDD TPLAVLSDFP RLTYDYFKQL FAQVTNPPID AIREELVTSL HTYLGGEANL LDETPEQAHR LRLEHPVLTP EKLARIKALD EENLRATTLS TTFDVKAGGE GLVAALDELC WQAAEAVQQG FTILVLSDRE AGPGRAPIPA ALAVGAVHHH LIRTGLRARC SLVVDSGEPR QVHHLCVLVG YGADAVCPYL ALETVADLVR MGEITGLHVQ EAQQRYIKAL CKGLLKVMSK MGISVFQSYR GAQIFEIVGL SEEVVERCFA RTVSRLGGVG FDVLAEEVRL RYEQAYPEVP VAGAPKDELE RGGFYQWRRG GEHHRYNPLT VAKLQHAVRE RDPKDYEEFA RLVNDESRRL CKLRGLLDFV PAERPIPLEE VEPWTSIVRR FKTGAMSFGS ISREAHEVLA EAMNRIGGKS NTGEGGEEPE RYARDNPKRS AIKQVASGRF GVTIGYLASA DEIQIKMAQG AKPGEGGQLP GEKVYPWIAR VRHSTPWVGL ISPPPHHDIY SIEDLAQLIY DLKQANPTAR ISVKLVAEAG VGTIAAGVAK GGADVILISG HDGGTGASPI TSILHAGLPW ELGLSETHQA LVANGLRERV VVEVDGQLQT GRDVAIAALL GAQEFGFATA PLVAIGCIRM RKCHLNTCPV GIATQDPELR KKFTGQPEHV INYFYFVAEE LRQIMAQLGF RTVEEMVGRV DRLRIRSTDH WKARYLDLRP LIKKVETPEI LRPFSQKPPA RRDVPTLDER VLPRLKPALE RREPVRLHVA IRNTDRTVGA RISYEIATRY GESGLPEDTI WLDCEGSAGQ SFGAFLAPGV TLRVIGEAND YFGKGLSGGK LIIHPPENAA YPAESNIIIG NVALYGATSG EAYIRGRAGE RFAVRNSGAR AVVEGVGDHG CEYMTGGRVV VLGPTGRNFA AGMSGGIAYV LDVDGLFAER HCNLDMVELM PVVEEADIAE LRELIERHYA YTGSPVARWV LEDWPNILAR FVKVFPIDYR KALERLAREQ EEANLRQHLA A
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