Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1187 |
Symbol | |
ID | 8567834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1389535 |
End bp | 1390596 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_003290465 |
Protein GI | 268316746 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGATT TCCCCCCGCT TCAGAACGAT CTGTTGCTCC GGGCGGCGCG GCGCGAGCCG GTCGAGCGCA CGCCCGTCTG GATCATGCGG CAGGCCGGCC GCTATCTTCC TGAATATCGG GCGCTTCGGG CCGACGAGGC CTTTTTCGAC GTGGTGCGCA CGCCGGAGCT GGCCACCGAG GTGACGCTGC AGCCGCTGCG GCGCTTTCCG CTCGATGCGG CCATTATTTT TTCCGACATC CTGGTGGTGC CGCAGGCGCT GGGGCTGCGC GTGGAGATGA TCCCGGGCCG CGGGCCGTAC TTTCCCGATC CGCTGCGCAC GGTTGAAGAC CTGCGGCGGC TCCGGCGGCC GGATGTGCGC GAGGCGCTGC GCTACATGCT GGAAGCGATC ACGATGACGC GGAAGGCCCT GGCCGGTCGC GTGCCGCTCA TCGGCTTCTG CGGAGCGCCC TGGACGCTCA TGGCCTACAT GGTGGAGGGC GGAGGCAGCA AGACGTTCGC CCGCGCCAAG GGCTGGCTCT ACCGGCAGCC CGAGGCCAGC CACCGACTGC TTTCGCTGCT GACCGACGTG CTCGTGGAGT TTCTGATCGC ACAGATCGAC GCGGGCGCAC AGGTGGTGCA GGTGTTCGAT TCCTGGGCCG GCGTGTTGAG CCCGGACCTG TTTCGCACCT TTGCGCTTCC GTACCTGCGC CGCATCGGCG AGGAGGTCGG GAAGGCCCGG CCCGAGGTAC CGCGCATCGT GTTCGCCCGG GGTGCCCATG CATCGCTGGC CGAACTGGCC GAGGCAGGTT ACGACGTGGT GGGGCTCGAC TGGACGATCG ACCCGCGCCA GGCCCGAGAG CTGACGGGCG GGCGCGTGGC CCTGCAGGGC AACCTGGATC CCTGTGCGCT GTACGCCGAG CCCGAAACGA TCCGCCGGCT GACGCACCGG ATGCTCGAAG CCTTCGGACC GCGCGGGCAC ATCGCCAACC TGGGGCACGG CCTGCACCCC GACCACAACC CCGATCACGT GCGCGCCTTC GTGGAAGCCG TGCACGACTA CGTACCGGTG GCTTCGGAAT GA
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Protein sequence | MTDFPPLQND LLLRAARREP VERTPVWIMR QAGRYLPEYR ALRADEAFFD VVRTPELATE VTLQPLRRFP LDAAIIFSDI LVVPQALGLR VEMIPGRGPY FPDPLRTVED LRRLRRPDVR EALRYMLEAI TMTRKALAGR VPLIGFCGAP WTLMAYMVEG GGSKTFARAK GWLYRQPEAS HRLLSLLTDV LVEFLIAQID AGAQVVQVFD SWAGVLSPDL FRTFALPYLR RIGEEVGKAR PEVPRIVFAR GAHASLAELA EAGYDVVGLD WTIDPRQARE LTGGRVALQG NLDPCALYAE PETIRRLTHR MLEAFGPRGH IANLGHGLHP DHNPDHVRAF VEAVHDYVPV ASE
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