Gene Rmar_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1170 
Symbol 
ID8567816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1364343 
End bp1365620 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content61% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003290448 
Protein GI268316729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAAAG TCAAAGGCCT TCGCTGGTGG ATTATCAGCC TGATCGCGAT TGCCACTGTC 
ATTAACTACA TCGACCGGGG TGCGCTTTCG ATCCTCTGGC CCAACATCTC CGCCGATCTG
GGGATGACCA AAGAGGATTA TTCCCTGATC GCCATCATGT TTACAATCGC CTATGCGATC
AGTCAGACGC TCTCCGGGCG GCTGTACGAC TGGGTCGGCA CGCGCCTCGG CTTTGTCATT
TCGATCACGG TCTGGTCGAT TTCCATTGCG CTCCATGCCA TTGCGCGGAG CGTGACCAGC
TTCAGCATCT TCCGATTTCT GCTCGGGCTG GGCGAGGCCG GCAACTGGCC CGGCGCCACC
AAGGCGGTGG CCGAGTGGTT TCCGATCAAA GACCGGGCGC TGGCGCAGGG CATTTTCAAC
GCCGGGGCCT CCATCGGGTC CATCATCTCG CCGCCGCTGA TCGCCTTCCT GTACCTGTGG
CTGGGCTGGC AGGCGACCTT TGTGGTGCTG GGCGGACTGG GTCTGCTCTG GCTCATTCCC
TGGGTGATCG TCTACAAGGC GCTTCCAGAC CGCCATCCCT GGCTGACCGA GGAGGAGCGT
CAGTACATTC TGAGCGGACA GAAAATCGAA GGTGCCGAGG CGGAGGATGA ACGGGTGCCT
GGCTTTTGGG AACTTCTCTC GTACAAACAG ACCTGGTCGG TGCTCGTGTC CCGCTTTTTC
CTGGACCCGA TCTGGTGGCT TTTCGTGTTC TGGCTGCCCA TCTACCTGCA CGACCGGTTT
GGCTTCGACA TCCAGCAGAT CGGCCTTTCA GCATGGGTGC CGTACGTGGG AGCGGCCGCC
GGGGCGCTGT TTGGCGGCTG GTATGCCGGT TTCCTGATGC GTCGGGGCTG GACGGTGGAC
AAGGCCCGCA AATGGGCCAT CACGCTCGGC GGGCTGATCA TGCTGCCCGG GTTGCTGCTC
ACCTCGATTG CAGCCCATCC CGTCGTGGCT GTCCTGTTGA TCGCCGTGGT GCTGTTCGGA
TTCCAGGTTT CCATCGGCAA CATCCAGACG TTGCCCAGCG ACTTCTATTC CGGAAAGGCC
GTCGGGTCGG TGGCCGGTAT GGGCGGGACC ACGGCTGCGC TCGGGGTGAT CATAACAACC
TGGCTGGTTC CCAAGCTGGT GGTGGCCAGT TACGTACCGT TTTTCCTGAT GGGTGCCATG
CTGGTACCGC TGGGTGTGCT CTCTGTGTAC GTGCTGGGTG GCCGCATTCG GCGTGTACCA
CTGCGTCGGC GGCCCTGA
 
Protein sequence
MRKVKGLRWW IISLIAIATV INYIDRGALS ILWPNISADL GMTKEDYSLI AIMFTIAYAI 
SQTLSGRLYD WVGTRLGFVI SITVWSISIA LHAIARSVTS FSIFRFLLGL GEAGNWPGAT
KAVAEWFPIK DRALAQGIFN AGASIGSIIS PPLIAFLYLW LGWQATFVVL GGLGLLWLIP
WVIVYKALPD RHPWLTEEER QYILSGQKIE GAEAEDERVP GFWELLSYKQ TWSVLVSRFF
LDPIWWLFVF WLPIYLHDRF GFDIQQIGLS AWVPYVGAAA GALFGGWYAG FLMRRGWTVD
KARKWAITLG GLIMLPGLLL TSIAAHPVVA VLLIAVVLFG FQVSIGNIQT LPSDFYSGKA
VGSVAGMGGT TAALGVIITT WLVPKLVVAS YVPFFLMGAM LVPLGVLSVY VLGGRIRRVP
LRRRP