Gene Rmar_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1158 
Symbol 
ID8567804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1345208 
End bp1346785 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003290436 
Protein GI268316717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGC GCTACTACCT GTCGACTGCG GTGGCCGCTC TTTTCCTGAT CGGCGGCACG 
GCATGGGCCC AGGTGACCGT CGTCAAGAGC GGCAACTGGA GCGACCCGAC GACCTGGTCT
ACGGGGGCCG TTCCGACCGC CACCGACGAC GTGGTCATCG AAGATAGTAC AGTGTATGTC
GATGTTGCGG ACGCCAAGGC TCGCAACGTG ACGATTCGGG GGAGCGGCCA ACTCCTCTAT
CAGCGCGATC CTTCGCTGCA GGGCTTCGAG CTCTCCGTGC ACGGGAATCT CGTGATTGAA
GGCCCGGACG CCGAGTTGCG GCCGCTTTCG CAGGAAGACG AGGCAACCGG CCAGGGGCTG
GGCATCGTCT ATCATCGCCT GATCATCTAC GGTGACATCG ACAACAGCAC GGGTGGAACG
TTCGATATGC GTCGCGGCGC GACGAGCTCG GATCCGCCCA CGGCCGCTTT TGTCGACCTC
TACTTTGTGG GCGATACCGA CTCGCACGTA ACGCTGGGTG AGTATGACAC CAATAAAAAC
CAGCTCTTTC AGGTTTTCAT TCAGAAGGAA AACGGTGCAA AGGTAGTGCT GCACAGCGAT
GTAACCCAGG ACAACAACAG TCTGGCCAAG CTCCACCTCG ACAGCGGCTA CATCGTCACG
AACGAGTTCC GCTGGCGGGT ATATTCGAAC AGCTCCAGTG CGGTGGTGGG CGGCTCGCCG
GAGTCCTATG TGATCGGTGC GCTGTCGCGG GGCATCCCGA AGAGTGGCGA CCCCTATGAG
CGCGTCTTTC CGGTGGGCGA CGAAAACGGC TATCGGCCCG TGACGATCTA TTCGTCCGAC
GTGGTGCCGG ACGACCAGGA CTTCGAAGTT CGGGCCATTT CCGGCGATGC CGATCCCGGT
GGGGCTACGT TCCAGGGTGG ATTGACGGAC GTGTCCCCGG TGCGGTACTA CGCCTTCACC
ATGTACGAAC GGGATTCGAG CGACCCGTAC ACGGTGGAGA AAATCACCAT TACCTATGGC
TCGGACGACG GGGTTCCCGA GGGGAGCAGC GATTTCGTGG TGGCCACATC CGTGGATGCA
AGCCGTATGG TGTGGCGCAA CAGTGGCGGT TTCGATCCGG CTACCGGCCA GCCTCACGTG
ACGAGTCTGG CCAATCCGCC GACGCCGATT CAGTCCGATG TGCTGACGGA CTTCACGTTC
GAGATTTCGG TGGTACCGGG CAATCCGCCG CAGTTTTCGC GGGACACCTA CTACGCGGCC
ATCGGTACGA AGAGTGCCTT CACGGTAGCG GCCGAAGAGA TTACGGCCGT GGATGGCTTC
CGACTGGGTC CGGCCTATCC CAATCCCTTC CAGGAGGCTA CGCGCATTGT GCTGGAGTTG
CCGCGCGTGG CTCCGGTGGA CGTCCGCGTG TACGACCTGC TCGGCCGTGA AGTAGCCCGG
CTGGCGGAAG GAACGTGGAC GCCCGGTACG CACACACTGA TGTGGAAACC GGCTGCTGCG
GTTGCGCCGG GGCTCTACCT CATCCGCGTG CAGGCGGGAG CCCTGACGGC AACCCGGAAA
GTGATGGTGG TGCGCTAA
 
Protein sequence
MKLRYYLSTA VAALFLIGGT AWAQVTVVKS GNWSDPTTWS TGAVPTATDD VVIEDSTVYV 
DVADAKARNV TIRGSGQLLY QRDPSLQGFE LSVHGNLVIE GPDAELRPLS QEDEATGQGL
GIVYHRLIIY GDIDNSTGGT FDMRRGATSS DPPTAAFVDL YFVGDTDSHV TLGEYDTNKN
QLFQVFIQKE NGAKVVLHSD VTQDNNSLAK LHLDSGYIVT NEFRWRVYSN SSSAVVGGSP
ESYVIGALSR GIPKSGDPYE RVFPVGDENG YRPVTIYSSD VVPDDQDFEV RAISGDADPG
GATFQGGLTD VSPVRYYAFT MYERDSSDPY TVEKITITYG SDDGVPEGSS DFVVATSVDA
SRMVWRNSGG FDPATGQPHV TSLANPPTPI QSDVLTDFTF EISVVPGNPP QFSRDTYYAA
IGTKSAFTVA AEEITAVDGF RLGPAYPNPF QEATRIVLEL PRVAPVDVRV YDLLGREVAR
LAEGTWTPGT HTLMWKPAAA VAPGLYLIRV QAGALTATRK VMVVR