Gene Rmar_1075 details

Gene Information

• Locus tag: Rmar_1075
• ID: 8567716
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1237583
• End bp: 1238146
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 66%
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_003290355
• Protein GI: 268316636

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGCCGG GCGCTTCCAC TTCGGAGCAG CAGGAGCTGG CGGCAAGGGT GCGCCAGGGC 
GATGCGGCGG CATTCGAGCG GCTGTTTCGG GCCTACTACA CGCCGCTCGT GCACTTTGCC 
GTGCACATCG TGGGCACGCT CCCGGAGGCC GAGGAAGTGG TGCAGCGCGT GTTCGTCAAC 
ATCTGGCGCA ACCGGGCCGC CTGGGCGCCC CACGTCTCGG TAGCGGCCTA TCTCTACGGC 
GCCGTGCGCA ACGAAGCCGT CAAATACAGC CAGCGGCGTC CGCCCGCCGT ACCGCTGGAA 
GAAGCGGCCG AAATGGCCTG CGACCGTCCC CACCCGGACC AGCAACTGGT CGGCAACGAC 
TTGACCGAAC TGATCGAACG GCTCATCCAG GAGCTGCCCG AGCAGCGACG GCTGATCTTC 
ACCCTCTCGC GCGATCACGG GCTCACCTAC GCCGAAATTG CGCAATCCCT GGGCATCTCG 
ATCAAGACTG TCGAAACGCA GATGGGGCGC GCCCTGCGTC AGCTTCGGGA GCGTCTCCAG 
GCGTGGTTGA ACGTTGCGCC CTGA 

 

Protein sequence

MRPGASTSEQ QELAARVRQG DAAAFERLFR AYYTPLVHFA VHIVGTLPEA EEVVQRVFVN 
IWRNRAAWAP HVSVAAYLYG AVRNEAVKYS QRRPPAVPLE EAAEMACDRP HPDQQLVGND 
LTELIERLIQ ELPEQRRLIF TLSRDHGLTY AEIAQSLGIS IKTVETQMGR ALRQLRERLQ 
AWLNVAP