Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1058 |
Symbol | |
ID | 8567699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 1207150 |
End bp | 1208097 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_003290338 |
Protein GI | 268316619 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGC TTTTTTCCTT TCAGGAACAG GACCTGCTCT ACCGGCTCGC GCTGGCGGCG GCCGGCCTGG TCATCGTCTT CGTCCTGGTG CGCGTGAGCA TCCGGCTGCT CACGCGCCGC ATCGACGATC CGGACCGCGT CTACCGCATC AGCCGCCAGA TCCGACGCAC CGGCGCCGTC GTCATGATGG GGCTGCTGCT GGTGATCTTT TCGCCCCGTC CGGCCGAGCT GGTGGCCATC CTGACGGTCG TCGGCGCCGG GCTGGCCATC GCGTTGCGCG AGGCCCTGCT GAGCGTGGCC GGCTGGCTTC GCATCGTGCT GGTGCATCCC TACCAGCAGG GCGACCGCAT CGAGATCAAC GGCGTGCGCG GCGACGTGAT CGACATCCGC GTCATGCGCA CCACGCTCAT GGAGATCGGC GGCTGGGTGG ACGCCGACCA GAGCACCGGC CGGCTCGTGC ACATTCCGAA CGCCTGGGTC TTTCTCTATC CGGTCTACAA CTACACCCAG GGCTTTCGCT TCATCTGGAA CGAGCTGTCG GTGACAGTCA CCTTCCGGAG CGACTGGCAG GCCGCCCGCG ACATCATGGA ATCGCTCGCG CGCGAATCGA CGGCCATCGT CGAACGCCAG GTGGCCGAAG AAATCCGCCA GATGTCCCGG GAATTTCTCG TACATTACAG CATCCTGACG CCGTTCGTCT ACGTGCGCAT CGTGGAGAAC GGCATCCGGC TGACGCTGCG TTACCTGTGC GAGGTGCGCA AGCGCCGGGG TACCGAGCAC GCGCTGACGG TCAGCATTCT GGAAGCCTTC CGCCGACACG GCGGGATCGA GCTGGCCTAC CCGGCCGTGC AGGTGGCCCT GCCCGACACG CCGCAGTTTG GACCGCTACC GCCGACCGAC CATGACGCCC CAGGAACTCG CCCGCCTGAT CGACCACACG GCACTTAA
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Protein sequence | MSELFSFQEQ DLLYRLALAA AGLVIVFVLV RVSIRLLTRR IDDPDRVYRI SRQIRRTGAV VMMGLLLVIF SPRPAELVAI LTVVGAGLAI ALREALLSVA GWLRIVLVHP YQQGDRIEIN GVRGDVIDIR VMRTTLMEIG GWVDADQSTG RLVHIPNAWV FLYPVYNYTQ GFRFIWNELS VTVTFRSDWQ AARDIMESLA RESTAIVERQ VAEEIRQMSR EFLVHYSILT PFVYVRIVEN GIRLTLRYLC EVRKRRGTEH ALTVSILEAF RRHGGIELAY PAVQVALPDT PQFGPLPPTD HDAPGTRPPD RPHGT
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