Gene Rmar_0987 details

Gene Information

• Locus tag: Rmar_0987
• ID: 8567627
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1122105
• End bp: 1122806
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 67%
• Product: two component transcriptional regulator, winged helix family
• Protein accession: YP_003290269
• Protein GI: 268316550

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.195539
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCGC GCATTCTGAT CGTCGAAGAC GATACGCCGC TGCGGGCGCT GCTGCAGGAG 
CGACTGGCGG CCGAGGGCTA TGCGGTCGAG GCCGTCGCCA CGGGCGAGGA AGCACTGCAG 
GCGCTGGAGG CCCGGCCGCC GGACCTGGTG GTGCTGGACC TGATGCTGCC GGGTATGGAC 
GGGCTGGAGG TGTGTCGCCG GTTGCGGGCA CGCCATCCGG CCGTGTACGT GCTGATGCTC 
ACGGCACGCT CGAGCGAACT GGATCGCGTG GTCGGGCTGG AAGTCGGGGC CGACGATTAC 
GTGACCAAGC CGTTCAGCCT GAACGAACTG GTGGCGCGCG TGCGGGCCGG ATTGCGTCGG 
CTGCAACTGG ATCGGGAGAC GGCCGACGAG GCGCCGCTGG AATTTGACGG ACTGCGCATC 
GATCCGGTGC GACGGCAGGT CTGGCGCGAC GGACAGCCCG TACACCTGAC CGTCCGGGAA 
TTCGAGCTGC TGCTGTTTCT GGCCCGGCAT CCGGATCGGC CGTTCACCCG GCTGCAACTG 
CTCCGCGAGG TCTGGGGCAT TGACTATCCC GGCTATGCGC GGACGGTCGA TTCGCACATC 
CAGCGGCTTC GGGCCAAGAT CGAACCCACC CCAGGCGCGC CGCGCTACAT CCGGACGGTC 
TGGGGCGTCG GCTACAAGTT TCAATCGAGT GAAGAGCCAT GA 

 

Protein sequence

MSARILIVED DTPLRALLQE RLAAEGYAVE AVATGEEALQ ALEARPPDLV VLDLMLPGMD 
GLEVCRRLRA RHPAVYVLML TARSSELDRV VGLEVGADDY VTKPFSLNEL VARVRAGLRR 
LQLDRETADE APLEFDGLRI DPVRRQVWRD GQPVHLTVRE FELLLFLARH PDRPFTRLQL 
LREVWGIDYP GYARTVDSHI QRLRAKIEPT PGAPRYIRTV WGVGYKFQSS EEP