Gene Rmar_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0953 
Symbol 
ID8567592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1082598 
End bp1086641 
Gene Length4044 bp 
Protein Length1347 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003290235 
Protein GI268316516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCCG TGGTGTATAC CGAGAGCATG TGCATACGCA GGAGCGTGGC CTGTCTGCTG 
GGAGGCTGGC TGGCGCTGAG CGCCGCGGCC CAGCCGGTCA CGGTCCGTTC GCTGGGAAGC
ACGCCGCAGG GTGACGTGCT GGAAGTGGTG GCGCAGTGGG TGCTCCCGCT GGCAGCGGCG
CTCGACTCGG CCGGTGTATC GGCGCTTTCG TGGAAGGCCG TCGTGGCGGC TACTGGCAGC
GCCTGGGAGA CGTCCGAGAC GATCTGGCTT CCCGCACCGG TAACGCCACG CGTCGAAATC
GTGGCGGCCG ACTACGAAGA GGTGCCACTG GCACTGGGAG CGGAGGGGGC GTCGCTGGCC
GCCTGGCTCA ACCAGCCACC CGTTGAGGTG GTGGGCGTGG GCATGGAGCG CCGCCGTCCG
GCCGCCACGC TGAATGCCCG CCTGCTGGTC TACGACGAAG CCCGGCAGGT ACTCCGGCGC
TACCGCCGGT TGCAGGTACA GTTACGTTAC CCCGTGGCAC GGACTTCCAT TCTGGGCACG
AGCCTGCGAC CGTCGAATAA TCCGCATCTG CAGGTCACCC GCAGCGTGCT GGCCGACGGG
GCCATCGTCA AGTTCCCGAT CCGGGAAGAA GGCATCTACC GTATCGATCG GCCCACGCTG
GCCGAACTGC TGGCGCGCGT CGGGCGCTCC GTGGACGAGA TCGACCCCCG TCAGCTTCAG
CTCTACGGCA ACGGTGGCCG TCCCCTTCCG GCCCTGAACA GTGCGCCGCG CCCGGCCGAT
CTGATCGAAA ACCCGGTCCT GGGCGTCGGG CTCGACGACG GTTCCTTCGA CGAAGGCGAT
GCGCTGATCT TCTACGCGGC CGGTGTGCAG GGGTGGACCT ACAACGCGCA GCGGGGCGAG
TGGGAGCATT ACACGCACCC GTTTTCCAAT GCGAACTATT ACTTTCTCAA GGTGGGAGAC
CGAGCAGGGC GCCGGATTGA CACGGTGCCG TTCCCGAACG CCCCCGATGT GCAGCCGGTC
GCGCAGCTCA CCGGACGCTA CGTGGTCGAT CCGGAAGATT TCCTCTGGAG TAAGGAGGGG
ATTGCCGAGG GGAAGGGCAG CGGGCTGACC TGGGTAAGCG TGCCGATCAG TCCGGCCGGA
CGCCTGCGCA TTCTGGAAGG CGTGACGCCG CCGGGTTTGA CGGCCGGGAC CGTCACCTAC
CGCGCCCGTG TGGCGATTCA ATCGAATCCG GCAGCCTACG CCATATTCGT TTCACGGGGA
CAGGAACTGG CCCGCGCCTC GGCCGGGGTG GTCTTCCCGG ATCCGGAAAG TCCTGTCGCG
CGGGCCACGG AGGCAACCTT CACGCAGGCG CTGGCCACGG CCACGCCGCT GGAGCTGGAG
ATGACGCTGA CGAACCCCGG GGGCGATCCA CGGGCGGCGC TCGAGTGGCT GCGCGTGTTC
TACCCCATGC GGCTGGTGGC CACCGAGGGC TACCTGCGCT TTTTTACGCC GCCGGGCCAG
ACCGGCACCT TCGAATTTCT GCTGGAGGGC TTTGCCGAAG CGCCGCAGGT GTGGGACGTG
ACCGAACCGG GCACCATGTA TCGACTGGAG GTGCGGGCGA CGTCCGGTGG GTATCGCGTG
CAGGTGGTCT GCAACGATCC GGAACGCCCC CGCGAACTGG TGGCCTTTAC GCCGAACGCC
GTGCGTCCGC TCGATCCGTC CGGCGCCCGC CGCGTGCCCA ACCAGAACCT GCACGGCATC
GATTTCTACC CGGATCTGGC GATCATCACG GCCGATACGT TCCGCGTCTA TGCCGAACAA
CTGGCCGAAC ACCGGCGCGA CCAGGGACTC CGCGTGGTGG TGGCTACTGT CGAGCAGATC
TACAACGAGT TTTCAGGCGG GGTGCCCGAC ATGCGGGCCG TGCGCGACTA CCTGAAGTTC
CTCTACGACC GGGCGCCCGA CGAATCGTCG CTCCTGCGCT ACGCGCTGCT TTTCGGCGAC
GGGCACTACA ACTACCGGGA GCTCTGGCAG AAGCCGACGC TGAAAAACTG GGTGCCGCCT
TACGAGACGG TCGATTCCTA CCACCCGATC AACTCCTACA CGAGCGACGA CTACTTCGGG
CTGCTCGACG ACGACGAAGG CCTCTGGCCT GACTACGGCG CCGGCGCCTA CAGCACGGAA
CGGCTGGATC TGGGCATCGG CCGCCTTCCG GTGCAGACGC CCGAGGAGGC GCAGCAGGTG
CTCGACAAAA TCTTGCGCTA CGAAAACCCG GCCACCTACG GGCCCTGGCG CATGCGCTAC
ACGTTCGTGG CCGACGACGG CCCGACGGGG GTGGCCGCGC AGCAGAACGA CCTGGACCTG
CACGTGCAGA ACATCGACGT GGTGGCCGAG GAAGTGAAAC AGTACTTCCC GGCCATCGAC
GTGCAGAAGA TCTATGCTGT GTCCTACCCG CGCGTGTTCA TGGGCATCTG GCGCATTCCC
GATGCCCGGC GCGACATTCT GCGCGTGCTG GAAGAAGGCA CGCTGGTGAT CAACTACAGC
GGACACGGCA GCAGCGACGT GCTCGCGCAG GAAGAGATCT TTACCAAAGA CGACGCGGCC
GCGCTGACCA ACCGCGATCG CCTGGCCGTC TTTATCACGG CCACCTGCAC CTGGGGCCGC
TGGGACATGA CCGAGGCGCA AAGCGGGGGC GAAGTGCTCC TGCTGAATCC CAATGGTGGC
GCCGTGGCCG TCTTCAGCGC CGTGCGGCTC GTTTACACGT CGGCGGACAC GAGTGTGCTG
AACGTGGGCC TGAACCGCAT GCTCAACAAG TACCTGTTCC GGCCGGAGCC GGACGGACAG
ATGCCCCGGC TGGGCGATGC GCTGCGCCGC ATGAAGAACA CGCGGGCCGG GCTGCAGAAC
AACAACCGGC GCTTCAACCT GCTGGGCGAT CCGACGCTGC GCATCGGCTT CCCGCATCGG
CGCGTCGTAG TGGAAAGCAT CAACGACCAG GCGCCGGATC CCGCACAGCC GGTGCCCATG
CGGGCGCTCG AGCGCGTGAC GGTGCGCGGC TACGTGCAGG ACGCCGCGGG CCAGCTCGAC
CCCGGCTTCA ACGGGGTGGC CACGCTTACC GTCTTCGACG CCGAGCGGCA GAAGCCCCTG
CCGTACTGGC GCTACATGCC CACGCCGTAC TACCTGGTGC GGGAGGACCT GATCTGGCGT
GGCCAGGTGG ATGTGCGCAA CGGCCGTTTT GCGGCCACTT TTGTCGTGCC CAAGGACATT
CTCTACAGCA ACCGGCGCGG GCGCATTTCG GCCTACGCCT ACAACGCCGA GACGCACGCG
GCCGGCTACA CCGAGGGGTT CGTGGTGGGC GGAACGGCCG CCTCGATCCC GGACGACCGG
GAAGGACCGG AAATCCGGCT CTATCTGAAC GATACGACGT TCGTCTCCGG CGGACTGGTG
CCGCCCAACC CGCGGCTGAT CGTGCAGCTC TACGACGCCT CCGGCATCAA CACGGTAGGG
GCCGGGCTGG GGCATGAGCT GCTGCTGATC ATCGACGGCG ACGAGGCGCG TGCGCAGAAC
CTGAGCAGCG CCTTTCGGAG CGAGCCCAAC TCGTATCAGC GCGGCCGGGT GGAGTGGACG
CTCACCGACC TGACGCCCGG ACCGCATACG CTCACGGTGC GGGCCTGGGA TGTGCTCAAC
AACGTCAGTA CCGCCTCGCT GGACTTCATC GTCAGCGACG ATAGCCGGCT CGAACTCCGC
AACGTGTTCA ACTACCCGAA CCCGACGACC GGCCCCACGC AATTCGTCTT TGAGCACAAC
CAGCCGGCCG GCACCCCGGC GCGCGTGCAG CTCCGGATCT ACACGCTGGC CGGACGTCCG
GTGCGCACGC TCGACGGCAT CGAGACGCTT CCGAGCGGCG TGTTGCCGGC CAACCTGGTC
ATGATCCCCT GGGACGGACG CGACGAAGAC CGCGACCCGC TGGCAACCGG TATCTACCTG
TACCGCCTGC GGGTGGAAAT AGAACGACCG GACGGCTCGC GCCAGGTGGC CGAGCACATC
GACCGCCTGG CCATCATTCG CTGA
 
Protein sequence
MKSVVYTESM CIRRSVACLL GGWLALSAAA QPVTVRSLGS TPQGDVLEVV AQWVLPLAAA 
LDSAGVSALS WKAVVAATGS AWETSETIWL PAPVTPRVEI VAADYEEVPL ALGAEGASLA
AWLNQPPVEV VGVGMERRRP AATLNARLLV YDEARQVLRR YRRLQVQLRY PVARTSILGT
SLRPSNNPHL QVTRSVLADG AIVKFPIREE GIYRIDRPTL AELLARVGRS VDEIDPRQLQ
LYGNGGRPLP ALNSAPRPAD LIENPVLGVG LDDGSFDEGD ALIFYAAGVQ GWTYNAQRGE
WEHYTHPFSN ANYYFLKVGD RAGRRIDTVP FPNAPDVQPV AQLTGRYVVD PEDFLWSKEG
IAEGKGSGLT WVSVPISPAG RLRILEGVTP PGLTAGTVTY RARVAIQSNP AAYAIFVSRG
QELARASAGV VFPDPESPVA RATEATFTQA LATATPLELE MTLTNPGGDP RAALEWLRVF
YPMRLVATEG YLRFFTPPGQ TGTFEFLLEG FAEAPQVWDV TEPGTMYRLE VRATSGGYRV
QVVCNDPERP RELVAFTPNA VRPLDPSGAR RVPNQNLHGI DFYPDLAIIT ADTFRVYAEQ
LAEHRRDQGL RVVVATVEQI YNEFSGGVPD MRAVRDYLKF LYDRAPDESS LLRYALLFGD
GHYNYRELWQ KPTLKNWVPP YETVDSYHPI NSYTSDDYFG LLDDDEGLWP DYGAGAYSTE
RLDLGIGRLP VQTPEEAQQV LDKILRYENP ATYGPWRMRY TFVADDGPTG VAAQQNDLDL
HVQNIDVVAE EVKQYFPAID VQKIYAVSYP RVFMGIWRIP DARRDILRVL EEGTLVINYS
GHGSSDVLAQ EEIFTKDDAA ALTNRDRLAV FITATCTWGR WDMTEAQSGG EVLLLNPNGG
AVAVFSAVRL VYTSADTSVL NVGLNRMLNK YLFRPEPDGQ MPRLGDALRR MKNTRAGLQN
NNRRFNLLGD PTLRIGFPHR RVVVESINDQ APDPAQPVPM RALERVTVRG YVQDAAGQLD
PGFNGVATLT VFDAERQKPL PYWRYMPTPY YLVREDLIWR GQVDVRNGRF AATFVVPKDI
LYSNRRGRIS AYAYNAETHA AGYTEGFVVG GTAASIPDDR EGPEIRLYLN DTTFVSGGLV
PPNPRLIVQL YDASGINTVG AGLGHELLLI IDGDEARAQN LSSAFRSEPN SYQRGRVEWT
LTDLTPGPHT LTVRAWDVLN NVSTASLDFI VSDDSRLELR NVFNYPNPTT GPTQFVFEHN
QPAGTPARVQ LRIYTLAGRP VRTLDGIETL PSGVLPANLV MIPWDGRDED RDPLATGIYL
YRLRVEIERP DGSRQVAEHI DRLAIIR