Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0836 |
Symbol | |
ID | 8567474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 958289 |
End bp | 960382 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_003290121 |
Protein GI | 268316402 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.473024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCAGA ACGAGCGCGA CAGCCTGGAG CTGGAACGGA AAAATACGCC TCCCGACGGC CCTCGCCTGC CTGAGCGGCG GCCGCGGTTT TCCGTCTGGA TTTATCTGGC GATTTTCCTG GCGCTGCTGG TGCACTTTTT CCTGTTCTGG ACGGGCACCG ACACCAGCAC CATCGAATAC AGCCAGTTTC TCGAATACGT AGAAAAAGGC TACGTGGAGC GCGTCGAGAT TGTCAACGAC ACGAAAGTGC AGGGGCGCTT CACGGAGGCC GCCGTACGCG AGGGCCTGGT GTCGGTACCG GTGCGCCAGA CCGACCTGCT TCGCGGCGCG CAGACGCCCG AACTGATCCG CCGCTTTACG ACCACCAAAC CGGCCGATCA TGATCTGACC AGCTTCCTGC TGGCCTACAA CGAACGGGCC CGCGCCGAGG GCCGTCCTAC CGTACAGTTC ACCGCCCGCA TCGAGGAGAA CTGGTTCGGC GGGCTGCTCA CGTGGATCTT TCCGCTCATT CTTATTGTGG CGCTCTGGGT GTTTCTGCTG CGCCGCATGA GCCCCAGTTC GCAGGTGCTC AATATCGGAA AGAACCGGGC CATTCTCTAC GATGCGATGG GCGATCACCG GGTCACGTTC AAGGACGTGG CCGGACTGGA CGAGGCCAAA GAAGAGGTCG CGGAAATCGT CGAGTTTCTG AAGAACCCGA AGAAGTTCAC GCGTCTGGGT GGCAAACTGC CCAAAGGCGT GCTGCTCGTA GGACCGCCGG GCACGGGGAA GACGCTGCTG GCCAAAGCGG TGGCCGGTGA GGCGGGCGTG CCGTTCTTTT CCATTTCGGG GAGCGACTTC GTCGAGATGT TCGTGGGCGT GGGGGCCGCG CGCGTGCGCG ATCTGTTCCG GCAGGCCAAG GAAAAGGCGC CCTGCATCAT TTTTATCGAC GAGATCGACG CGATCGGTCG CTCTCGTGGC CGCGGTATCA TGATGGGCGC CAACGACGAG CGCGAAAACA CGCTGAACCA GCTGCTCGTC GAGATGGACG GCTTCAACAC GGACAAGGGC GTCATCATCA TGGCGGCCAC GAACCGTCCC GACGTGCTCG ATCCGGCCCT GCTGCGGCCC GGCCGCTTCG ACCGACAGAT TCTCATCGAC AAGCCCGACC GCCGCGAGCG GCTGGAGATC TTCAAGGTGC ACACGCGCGA TCTGATCCTG GGCGACGACG TGGACCTGGA GGTGCTGGCT GGCCAGACGC CCGGCTTCGC CGGGGCCGAA ATCGCCAACG TCTGCAACGA GGCGGCCCTG CTGGCGGCCC GGAAGGGCAA AGAAGCTGTC GAGATGGAGG ACTTCGAGCA GGCGATCGAT CGCGTGATCG CCGGCCTGGA AAAGAAAAAC AAAATCATTT CCCCGGAAGA ACGCGAGATC GTCGCCTACC ACGAAGCCGG CCATGCCATC GTCGGCTGGT TCCTGCGCTA CACGGACCCG GTCGTCAAGG TCTCTATCGT CCCGCGCGGA CTGGCCGCCC TGGGCTACGC GCAGTACCTG CCCGAAGAGC GTTACCTCTA CACGAAAGAG GCGCTGCTCG ACCGGATGAC CATGGCCATC GGCGGGCGCG TGGCCGAAGA GCTGGTCTTC GGACGCATCT CGACCGGCGC GCAGAACGAC CTGGAACGCA TCACGCGCAT GGCCTACGCC ATGGTGGTAG ACTACGGCAT GAGCGAGCGC GTCGGATATG TCAGCTTCAA CCTGTCGGGC CAGTATGGCG AGCAGGCCTT CTTCGACAAG CCGTACTCCG AGGAGACGGC GCGGCTGATC GACGAAGAGG TGCGCCGGAT CATCAACGAG GTGCGGGAAC GTGCCCGCCG GATCCTCGAA GAAAAGCGGG ACAAGCTGGA GGCGCTGGCC CGCCGGCTGC TCGAAAAAGA GGTGCTGGGC CCGCGCGATC TGGTGGAGAT TCTCGGCCCA CGTCCCTACG GCGATTATCC CTCGCCCAAC GGTAAGGACG TGGAAGAATT GAAAGATCTG CAAAAAGGCG AACCCACCTC GTCTTCCGCC GTTGAAGCGC CTGCTCCGCA GACGGAGCGG CCCGAATCCT CTTCTGCCCC CTGA
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Protein sequence | MSQNERDSLE LERKNTPPDG PRLPERRPRF SVWIYLAIFL ALLVHFFLFW TGTDTSTIEY SQFLEYVEKG YVERVEIVND TKVQGRFTEA AVREGLVSVP VRQTDLLRGA QTPELIRRFT TTKPADHDLT SFLLAYNERA RAEGRPTVQF TARIEENWFG GLLTWIFPLI LIVALWVFLL RRMSPSSQVL NIGKNRAILY DAMGDHRVTF KDVAGLDEAK EEVAEIVEFL KNPKKFTRLG GKLPKGVLLV GPPGTGKTLL AKAVAGEAGV PFFSISGSDF VEMFVGVGAA RVRDLFRQAK EKAPCIIFID EIDAIGRSRG RGIMMGANDE RENTLNQLLV EMDGFNTDKG VIIMAATNRP DVLDPALLRP GRFDRQILID KPDRRERLEI FKVHTRDLIL GDDVDLEVLA GQTPGFAGAE IANVCNEAAL LAARKGKEAV EMEDFEQAID RVIAGLEKKN KIISPEEREI VAYHEAGHAI VGWFLRYTDP VVKVSIVPRG LAALGYAQYL PEERYLYTKE ALLDRMTMAI GGRVAEELVF GRISTGAQND LERITRMAYA MVVDYGMSER VGYVSFNLSG QYGEQAFFDK PYSEETARLI DEEVRRIINE VRERARRILE EKRDKLEALA RRLLEKEVLG PRDLVEILGP RPYGDYPSPN GKDVEELKDL QKGEPTSSSA VEAPAPQTER PESSSAP
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