Gene Rmar_0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0827 
Symbol 
ID8567465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp943895 
End bp945094 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content66% 
IMG OID 
ProductMembrane dipeptidase 
Protein accessionYP_003290112 
Protein GI268316393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGCT CCGTTGTCTT TTTGCTCCTG CTGGCCGGAC TGCTGGCGGC CTGCCGCTCT 
GAGGAGCAGC GGCTTTACGA ACGGGCCCGC GAACTGACCC AGCGATTCAT CCTCATCGAC
GGCCACATCG ATGTGCCTTA CCGGCTGCGT CAGTTTCCGG AAGACATCAC CCGGCGCACC
GAGCTGGGCG ACTTTGACTA CGAGCGCGCC CGCGCGGGCG GTCTGGACGC CCCGTTTTTC
TCCATCTACC TGCCGGCCGA GCTGCAGGAC ACGCCCGGTG CTTCTAAAGC GCTGGCCGAT
TCGTTGATCG ACATGGTCGA AGCGCTGGCC CGTCAGGCCC CCGACAAATT CATGCTGGCG
CGCTCGCCGG AGGACGTGCG CCGGGCCCAC CGGGAGGGGC GCATTGCGCT GCTCATGGGC
ATGGAGAACG GCTCCGGTCT GGAAGGCGAC CTGCGCAACG TCGCCTACTT CTACGAGCGG
GGCATCCGGT ACATCACGCT CACCCATGCC CGCGTCAACC AGATCTGCGA CAGCTCCTAC
GACACCACGC GCGTCTGGAA CGGCCTGAGC CCCTTCGGCG AACAGGTCGT CGACGAAATG
AACCGGCTCG GCATGCTCAT CGACGTCTCG CACGTATCCG ACAGCGCTTT CTACGACGTG
TTGCGCCGCA CGAAGGCCCC GGTGATCGCC TCGCATTCGT CGGCCCGGCA TTTCACGCCT
GGCTGGGAGC GCAACATGAG CGATGAGATG ATCCGGGCGC TGGCCGCCAA CGGCGGTGTG
ATCATGATCA ACTTCGGCTC CTCGTTTCTG CGCGGCGAAT ATCAGGCCAT GGGCGACTCG
CTCCGTCGGC AACTGCGGGC CGAACTGGAA GCGCAGGGCA TCGATCCCGA TTCGCCGGAA
GGGCGTCGCT GGATGGCGCT GCAGCGCAAG CGTCATCCCA TCGGCACGGT GGCCGACGTG
GCCGATCACA TCGACTACGT CGTGCAGCTC GTGGGCGTCG ATCACGTCGG GCTGGGCTCC
GACTTCGACG GCGTCTTTGC CCTGCCGGAG GGGCTGCAGG ACGTGTCGAT GTATCCGAAC
CTGGTGGCCG AGCTCCTGCG CCGCGGCTAC AGCGAGGAGG ACCTCGAAAA AATCCTGGGC
GGCAACCTGC TGCGCGTCTG GGAGGCCGTC GAAGCCGCCG CCGAGCTGCA GACACCTTAG
 
Protein sequence
MIRSVVFLLL LAGLLAACRS EEQRLYERAR ELTQRFILID GHIDVPYRLR QFPEDITRRT 
ELGDFDYERA RAGGLDAPFF SIYLPAELQD TPGASKALAD SLIDMVEALA RQAPDKFMLA
RSPEDVRRAH REGRIALLMG MENGSGLEGD LRNVAYFYER GIRYITLTHA RVNQICDSSY
DTTRVWNGLS PFGEQVVDEM NRLGMLIDVS HVSDSAFYDV LRRTKAPVIA SHSSARHFTP
GWERNMSDEM IRALAANGGV IMINFGSSFL RGEYQAMGDS LRRQLRAELE AQGIDPDSPE
GRRWMALQRK RHPIGTVADV ADHIDYVVQL VGVDHVGLGS DFDGVFALPE GLQDVSMYPN
LVAELLRRGY SEEDLEKILG GNLLRVWEAV EAAAELQTP