Gene Rmar_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0816 
Symbol 
ID8567454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp931915 
End bp932730 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content68% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003290101 
Protein GI268316382 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTGG GTTTGCAGGA TCGTATTGCG CTGGTGACGG GTGCCAGCAG CGGGCTGGGC 
TGGGCGGCGG CGCTGGAACT GGCCCGCGAA GGGTGCCGCG TGGCCATCTG CTCGCGTTCG
GAGGCGCGCA TTCAGGCGGC AGCCCGCCGC ATTGTCGAAG CACTCGGCCT GGCCGAAGAC
CGGGTACTGC CGCTGGTCTG CGACGTGACC GACGAGGCGC AGATCATCCG GATGATCGAA
CAGGTGGTCG ATCGGTGGAA CGTCCTGAAC ATTCTGGTGA CGAACGCCGG CGGGCCACCG
GCCGGCTACA TCGGCGACTT TACGGCCGAC GACTGGCGGG CGGCCCTGGA GCTGAACTTG
CTCAGCACGA TCAACCTCTG CCGACATGCG CTGCCGCACC TGCGCCGCGC GGCCCGCGAG
CCGAACGGCC TGGCCCGCAT TCTGATGATC ACCTCCATTT CGGCCAAGCA GCCGATCCCG
AACCTGTATC TGTCGAACGC CGCGCGGGCG GGCGTGCAGG GCTTCGCGAA GAGTCTGGCC
GAGGAACTGG GACCTGAAGG CATCACCGTC AACACGCTGC TGCCGGGCTA CACGCGCACC
GAACGGTTGC AGGAGCTGGC CCGGGTGCAG CAGCAGCGCA CCGGCCGCTC CCTTGAAGAA
ATCGAGACAA GCTGGGCCGA ACAGGCCGCG CTGAAGCGGA TCGGCGAGCC GCACGAGTTT
GCCGCGGCCG TGGCCTTTCT GGCCAGTGCC CGCGCCAGCT ACATCACGGG CGTAGCCTTC
CCGGTCGATG GCGGACGCTC GAAGCACCTG CTCTGA
 
Protein sequence
MDLGLQDRIA LVTGASSGLG WAAALELARE GCRVAICSRS EARIQAAARR IVEALGLAED 
RVLPLVCDVT DEAQIIRMIE QVVDRWNVLN ILVTNAGGPP AGYIGDFTAD DWRAALELNL
LSTINLCRHA LPHLRRAARE PNGLARILMI TSISAKQPIP NLYLSNAARA GVQGFAKSLA
EELGPEGITV NTLLPGYTRT ERLQELARVQ QQRTGRSLEE IETSWAEQAA LKRIGEPHEF
AAAVAFLASA RASYITGVAF PVDGGRSKHL L