| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0618 |
|---|
| Symbol | |
|---|
| ID | 8567252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 697691 |
|---|
| End bp | 700168 |
|---|
| Gene Length | 2478 bp |
|---|
| Protein Length | 825 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | phenylalanyl-tRNA synthetase, beta subunit |
|---|
| Protein accession | YP_003289906 |
|---|
| Protein GI | 268316187 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0228815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCT CCTACCGCTG GCTGCAGCAA TACATCGACC TGGACCTGTC CCCTTCGGAG
CTGGCTGAGG CCCTGATCGG CCTGGGTCTG GAAGTCGAAG AAGTCGAGCC GCTGGGCACC
GACCTTAAGG GCGTGGTGAT CGGCCGCGTG CTGGAGGTGC GCCCCCACCC CAACGCCGAC
CGCCTGACGC TCTGCCGCGT CGATCTGGGA AGCGGCGAGC CGGTCCCGAT CGTCTGCGGG
GCGCCCAACG TGGCGGCCGG CCAGAAGGTG GCCGTCGCCA CCCCCGGCAC CACGCTGCTG
CTGACCGACC GCGAGGGTAA CCGCCAGCCC GTTACGATCC GCAAGACGAA GATCCGGGGC
GAAGTGTCCG AGGGCATGAT CTGCGCCGAG GACGAACTCG GGCTCTCGGA CGACCACAGC
GGCATCCTGG TGCTGCCCGG CGACGCTCCC GTCGGCCACC CCTTCGTCGA ATACCTGCAG
CAGCAGGGCC TGACGGTGCC GGACTACCGG CTCGAAGTCA GCCTGACGCC CAACCGGGCC
GACGCGGCCA GCCATATCGG CATGGCCCGA GATCTCTCGG CGCTGCTCGA CCGGCCGCTG
CGTCGTCCCG AAGTGGCCGT ACCCGAACCC GGCGGCGAGG CTGCCCGCCA GGTGCAGGTG
ACCATCGACG CGCCGGAAGC CTGTCCGCGC TACGTGGCGC TGCTGGTGCG CAACGTGCGC
ATCGGTCCCT CGCCGCTCTG GCTGCGCCAG CGCCTGGCCG CCATCGGCCT GCGCTCGATC
AACAACGTGG TGGACGTGAC CAACTATGTG CTGCACGAGT GCGGCCAGCC GCTGCACGCC
TTCGACTTCG ACCAGCTGAT CGGCGGACGC ATCCACGTGC GGCTGGCCCG CGCGGGCGAG
CAGTTCACCA CGCTCGACGG CAAAACCCGC CAGCTTCCGG AAGGCGCCCT GCTGATCTGC
GACGCCGAGC GACCGGTGGC GCTGGCCGGC ATCATGGGCG GCGAGAACTC CGAAGTCACC
GACACCACGA CGAACATTCT CATCGAAAGC GCCTACTTCG ATCCGTCCAC CATCCGACGC
ACCTCGAAGG CACTGGGTCT GCAGACGGAC TCGTCCTATC GCTTCGAGCG CGGGGTCGAC
GCCGGCCTGC AGCGCTGGGC GGCCGCCCGC GCGGCTCAGC TCATCGTGGA GGTGGCCGGT
GGCGAGATCG TGCCCGGTGT CGTGGACGTG CAGGTGCGGT CGTTCGAGCC ACGCACCGTG
ACGCTACGCC TGCCGCGCCT GGCCCACGTA CTGGGCACCG AGATTCCGTC CGGCGAGGTG
CGGCGCATTC TGGATCGTCT GGGCTTTGCG CCGAAGCCGG AAGGTGAGGC CTTCCGCTGC
ACGGTGCCGC TCTACCGTCC GGACGTGCAC GAGGAAATCG ATCTGATCGA AGAAGTCGCC
CGCGTGCACG GCTACGACCG GCTCCCCATG CCCGAAGCGT TCACCGTGCC AGCGCGCGTG
CCCGACGAGC CGCCGGCCCA GGCGCTGCGT CGCCGCGTGC GCACCCTGCT GGCCGGCTTC
GGCCTGCGGG AAATCTACAC GAACAGCCTG CTACCACGCG AGGTGGTGCG CCGCTTCGTG
CCCGCCTCGG GTTCCGACCA CCAGACCGAC GCGCCGCATC TGGTCGAAAC GCTCAACCCC
ATCTCAGCCG AGATGGCCGT GCTGCGACCG TCGCTCCTGC CCGGTCTGGT GCAGACCATC
GTCTACAACC AGAACCGGGG CCAGCAGGTG CTGCGCTTCT TCGAGTTCGG TCGCGTCTTT
GCCCGTACGG ACCGCCCCGA CACGCCCGTG CCCGGCTTTG CCGAGCACGA AGCGCTCGTC
ATCGGACTGA GCGGCCCGCA CGCTCCCGAA GGCTGGGACG TGCAGCCGCG CCTGACGGAC
TTCTTCGATC TCAAGGGGCT GATCGAAACG CTGCTGGACA CGCTGCACCT GAGCGATCGC
ATGGCGCTGG TTCCGGCCGA ATCGCCCGAG CCGACGGTCG CCTATCAGAT GAACCTGGTG
GCCGACGGGC GCGTGCTGGG CACGCTGGCC CGCCTGTCGG ACGCGCTCCA GGAGGCCTAC
GAATTGCGCG CCCCGCTCTA CTACGCCGAG CTGAACTGGG ATGCCTTTGC CGAGATCGCC
CACCCGGCTC AGCAGCGCCG CTACCGGCCC TTCAGCCGCT TCCCCGAAGT GGACCGTGAC
CTGGCCGTAC TCGTCGATCG CGACCAGCCG GTCGGTCCCC TGCTCGAAAC CATCCGGGAG
GCCGGCGGCG AACTGCTCCG CCACGTGGGC GTCTTCGACC TGTACGAAGG CGAACGCATC
CCGTCCGGCA AAAAGAGCGT GGCCTTCTCG CTGCGCTTCG GCGCCGATCG GACGCTGACC
GACGAAGAGG TGGATGCCCG CCTCGAAGCG ATCGTCCGAG AACTCGAGCG CCGCTTCGGT
GCACAACTGC GCCGTTGA
|
|---|
| Protein sequence | MKLSYRWLQQ YIDLDLSPSE LAEALIGLGL EVEEVEPLGT DLKGVVIGRV LEVRPHPNAD
RLTLCRVDLG SGEPVPIVCG APNVAAGQKV AVATPGTTLL LTDREGNRQP VTIRKTKIRG
EVSEGMICAE DELGLSDDHS GILVLPGDAP VGHPFVEYLQ QQGLTVPDYR LEVSLTPNRA
DAASHIGMAR DLSALLDRPL RRPEVAVPEP GGEAARQVQV TIDAPEACPR YVALLVRNVR
IGPSPLWLRQ RLAAIGLRSI NNVVDVTNYV LHECGQPLHA FDFDQLIGGR IHVRLARAGE
QFTTLDGKTR QLPEGALLIC DAERPVALAG IMGGENSEVT DTTTNILIES AYFDPSTIRR
TSKALGLQTD SSYRFERGVD AGLQRWAAAR AAQLIVEVAG GEIVPGVVDV QVRSFEPRTV
TLRLPRLAHV LGTEIPSGEV RRILDRLGFA PKPEGEAFRC TVPLYRPDVH EEIDLIEEVA
RVHGYDRLPM PEAFTVPARV PDEPPAQALR RRVRTLLAGF GLREIYTNSL LPREVVRRFV
PASGSDHQTD APHLVETLNP ISAEMAVLRP SLLPGLVQTI VYNQNRGQQV LRFFEFGRVF
ARTDRPDTPV PGFAEHEALV IGLSGPHAPE GWDVQPRLTD FFDLKGLIET LLDTLHLSDR
MALVPAESPE PTVAYQMNLV ADGRVLGTLA RLSDALQEAY ELRAPLYYAE LNWDAFAEIA
HPAQQRRYRP FSRFPEVDRD LAVLVDRDQP VGPLLETIRE AGGELLRHVG VFDLYEGERI
PSGKKSVAFS LRFGADRTLT DEEVDARLEA IVRELERRFG AQLRR
|
|---|
| |