Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0596 |
Symbol | |
ID | 8567230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 674633 |
End bp | 676135 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | thiamine biosynthesis/tRNA modification protein ThiI |
Protein accession | YP_003289884 |
Protein GI | 268316165 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.461448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGAGC AAACCACCGG CGAACGTTCC CGGGCGCTGC TGTTTCTGCG GCCGGCTTCG GAGCTGACGC TCAAGTCGAG CCGGACCCGC CGGCGCTTCC AGCAACTGCT GGTGCGCAAC CTGAAAGACG CGCTGCGCAG CCAGGAGATT CCGTTTCGCT TCGTGGGCTC CTGGAGCTGG TTTCTGATCG AGACGGAGGC GCCGCTTCAG GCCATCGAGG CACTACGCCA CGTGCCGGGC ATCGGACCGA TTATGCCGGT GGAACTGGTC ACCGGCACGT CGCTGGAGGA GATCGTGCAG CGCGGGGCTG AGGCGTTTGC CGAGCGCGTG CGCGGCCGTC GCTTTGCCGT GCGCGCCCGG CGGCGGGGCG ACCATCCCTA CCGCTCCCGG GACATCGAGG TCGAACTCGG CGCAGCATTG CGCCCCTTCG CGGAGCGGGT CGATCTGACC AATCCGGAAG TGACGGTGCA TGTGGAAGTG CGGGAAGACC GCGCCTACTT CTACACCACC ATCATCAAAG GCCTGGGTGG CCTCCCGATC GGAAGCCAGG GGCAGGCGCT GGTGCTCATC TCCGGCGGCT TCGACTCGGC CGTGGCGGCC TGGCTGGCCA TGCGGCGTGG GGTGTCCGTC GATTACCTGT TCTGCAACCT GGGCGGCAAA GCCTACGAAC GGGCCGTGCT GCAGGTGGCC AAAGTGCTGG CCGACGCCTG GAGCTTCGGC ACGCGCCCCC GCTTCTATTC GGTGGACTTC GGGCCGGTCG TCGATGAAAT GCGCCGCCAT GTGCGCCCCG CCTACTGGCA GGTGGTACTC AAGCGGTTGA TGTACCGGGC CGGCGAAGCC GTGGCCCGCC GGACCGAAGC GCTGGCGCTC ATCACCGGTG AATCGCTTGG CCAGGTCTCC TCACAGACAC TCAAAAACCT GCAGGCCATC GAGGCAGGCA CCTCGCTGCC CGTATTGCGC CCGCTGCTGA CCTACGACAA GGAGGAGATC ATCAATCTGG CCCGGAAGAT CGGCACGGCC ACGCTCTCGG AGCGCGTGCG CGAATACTGT GCGCTGCCCC CCGATCGGCC CGTGACGGCC ACGCGTCCCG AAGCCGTCGA TGCCGAAATG GCCAGAATCG ATCTCTCGGT ACTCGACCAG GCCGTCGCCT CAGCCGAAGT GTACGATCTG CGTTCGCTCT CAGCCTCGGA ACTGGTGACC CCCTACCTGT TCATCGAGGA AATCCCGGAA GGTGCCGTGG TCATCGATTG CCAGAGCGAG GCGCTTTACG AACACTGGCA CTATCCGGGC GCCCTGCACA TGGATCCCTG GCAGCTCCTG CAGCAGTTCC GGCACCTGGA CCGCGATCGC GCCTACGTGC TCTATTGCCC GCGCGGATTG CAATCGGCCT ACGTGGCCGA GGTCATGCAG CGGGCCGGCT ACGAAGCCTA CTCGTTCAAG GGCGGCGTGC CGGCCCTCAG GGCCTATGCC CGAGCACGGG GCATCGAAGT GCCCGAGCTT TAA
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Protein sequence | MVEQTTGERS RALLFLRPAS ELTLKSSRTR RRFQQLLVRN LKDALRSQEI PFRFVGSWSW FLIETEAPLQ AIEALRHVPG IGPIMPVELV TGTSLEEIVQ RGAEAFAERV RGRRFAVRAR RRGDHPYRSR DIEVELGAAL RPFAERVDLT NPEVTVHVEV REDRAYFYTT IIKGLGGLPI GSQGQALVLI SGGFDSAVAA WLAMRRGVSV DYLFCNLGGK AYERAVLQVA KVLADAWSFG TRPRFYSVDF GPVVDEMRRH VRPAYWQVVL KRLMYRAGEA VARRTEALAL ITGESLGQVS SQTLKNLQAI EAGTSLPVLR PLLTYDKEEI INLARKIGTA TLSERVREYC ALPPDRPVTA TRPEAVDAEM ARIDLSVLDQ AVASAEVYDL RSLSASELVT PYLFIEEIPE GAVVIDCQSE ALYEHWHYPG ALHMDPWQLL QQFRHLDRDR AYVLYCPRGL QSAYVAEVMQ RAGYEAYSFK GGVPALRAYA RARGIEVPEL
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