Gene Rmar_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0596 
Symbol 
ID8567230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp674633 
End bp676135 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content66% 
IMG OID 
Productthiamine biosynthesis/tRNA modification protein ThiI 
Protein accessionYP_003289884 
Protein GI268316165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.461448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGAGC AAACCACCGG CGAACGTTCC CGGGCGCTGC TGTTTCTGCG GCCGGCTTCG 
GAGCTGACGC TCAAGTCGAG CCGGACCCGC CGGCGCTTCC AGCAACTGCT GGTGCGCAAC
CTGAAAGACG CGCTGCGCAG CCAGGAGATT CCGTTTCGCT TCGTGGGCTC CTGGAGCTGG
TTTCTGATCG AGACGGAGGC GCCGCTTCAG GCCATCGAGG CACTACGCCA CGTGCCGGGC
ATCGGACCGA TTATGCCGGT GGAACTGGTC ACCGGCACGT CGCTGGAGGA GATCGTGCAG
CGCGGGGCTG AGGCGTTTGC CGAGCGCGTG CGCGGCCGTC GCTTTGCCGT GCGCGCCCGG
CGGCGGGGCG ACCATCCCTA CCGCTCCCGG GACATCGAGG TCGAACTCGG CGCAGCATTG
CGCCCCTTCG CGGAGCGGGT CGATCTGACC AATCCGGAAG TGACGGTGCA TGTGGAAGTG
CGGGAAGACC GCGCCTACTT CTACACCACC ATCATCAAAG GCCTGGGTGG CCTCCCGATC
GGAAGCCAGG GGCAGGCGCT GGTGCTCATC TCCGGCGGCT TCGACTCGGC CGTGGCGGCC
TGGCTGGCCA TGCGGCGTGG GGTGTCCGTC GATTACCTGT TCTGCAACCT GGGCGGCAAA
GCCTACGAAC GGGCCGTGCT GCAGGTGGCC AAAGTGCTGG CCGACGCCTG GAGCTTCGGC
ACGCGCCCCC GCTTCTATTC GGTGGACTTC GGGCCGGTCG TCGATGAAAT GCGCCGCCAT
GTGCGCCCCG CCTACTGGCA GGTGGTACTC AAGCGGTTGA TGTACCGGGC CGGCGAAGCC
GTGGCCCGCC GGACCGAAGC GCTGGCGCTC ATCACCGGTG AATCGCTTGG CCAGGTCTCC
TCACAGACAC TCAAAAACCT GCAGGCCATC GAGGCAGGCA CCTCGCTGCC CGTATTGCGC
CCGCTGCTGA CCTACGACAA GGAGGAGATC ATCAATCTGG CCCGGAAGAT CGGCACGGCC
ACGCTCTCGG AGCGCGTGCG CGAATACTGT GCGCTGCCCC CCGATCGGCC CGTGACGGCC
ACGCGTCCCG AAGCCGTCGA TGCCGAAATG GCCAGAATCG ATCTCTCGGT ACTCGACCAG
GCCGTCGCCT CAGCCGAAGT GTACGATCTG CGTTCGCTCT CAGCCTCGGA ACTGGTGACC
CCCTACCTGT TCATCGAGGA AATCCCGGAA GGTGCCGTGG TCATCGATTG CCAGAGCGAG
GCGCTTTACG AACACTGGCA CTATCCGGGC GCCCTGCACA TGGATCCCTG GCAGCTCCTG
CAGCAGTTCC GGCACCTGGA CCGCGATCGC GCCTACGTGC TCTATTGCCC GCGCGGATTG
CAATCGGCCT ACGTGGCCGA GGTCATGCAG CGGGCCGGCT ACGAAGCCTA CTCGTTCAAG
GGCGGCGTGC CGGCCCTCAG GGCCTATGCC CGAGCACGGG GCATCGAAGT GCCCGAGCTT
TAA
 
Protein sequence
MVEQTTGERS RALLFLRPAS ELTLKSSRTR RRFQQLLVRN LKDALRSQEI PFRFVGSWSW 
FLIETEAPLQ AIEALRHVPG IGPIMPVELV TGTSLEEIVQ RGAEAFAERV RGRRFAVRAR
RRGDHPYRSR DIEVELGAAL RPFAERVDLT NPEVTVHVEV REDRAYFYTT IIKGLGGLPI
GSQGQALVLI SGGFDSAVAA WLAMRRGVSV DYLFCNLGGK AYERAVLQVA KVLADAWSFG
TRPRFYSVDF GPVVDEMRRH VRPAYWQVVL KRLMYRAGEA VARRTEALAL ITGESLGQVS
SQTLKNLQAI EAGTSLPVLR PLLTYDKEEI INLARKIGTA TLSERVREYC ALPPDRPVTA
TRPEAVDAEM ARIDLSVLDQ AVASAEVYDL RSLSASELVT PYLFIEEIPE GAVVIDCQSE
ALYEHWHYPG ALHMDPWQLL QQFRHLDRDR AYVLYCPRGL QSAYVAEVMQ RAGYEAYSFK
GGVPALRAYA RARGIEVPEL