Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0546 |
Symbol | |
ID | 8567180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 619728 |
End bp | 621467 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | peptidase M28 |
Protein accession | YP_003289835 |
Protein GI | 268316116 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.62656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCAAC GTATTGCACG AACATTTTTC GGCGTCCTGC TGGCATGCTG GCCCCTGCTG TCGCAGGCAC AGAGCCAGCG TCCCGCCCCC ACCCCCACCG TGTTCGACCA ACCCGCGCTC GTGCAGCGCT ACCAGACGAC GATCACGCCC GAAGACCTGG CCGCGCATCT GTTCATCGTG GCCTCTGACT ACTTCGAGGG ACGCGAAACC ACCACGCGCG GACAGAAACT GGCCGCCTAC TATCTGGCCT CCCAGTATCG CAAACTGGGC CTCGAGCCCG CCGGCACGCT GAAGCCGGAC CATCCCTACG CGCCGGAAGC CTACTTCCAG CCGTTCACCG TCTATGGCCA GCGGCTGCAG GAAGCACACC TGATCGCCGT GCAGGGCGCC GACACGCTGG CCGCGCTGGC GTTCGGTCCG GAGCAGGCCG ACCCGAACGG CTACCTGTGG TTGGGCGTCC GGCCCGAAAG CACCGGCGAG CTGGTCTTCG GCGGCTACGG CATTGCCGAT CCCGAGCTGG GCTACAACGA CTACGCCGCG CTGGCGGCCG ACAGCATCGA CCTGGTAGGC CGCTGGCTGC TGATTCTGGC CGACGAGCCG CTGGCCAACG ACTCGACCAG CCTGCTGACG CCGGACGGCC GTCCCTCACG GTGGACCACC CAGCCGTTCC TCAAGCTGCG CCGGGCGCTG GAGGCCGGCG TGGCCGGCGT GATCCTGGTA GGCGACCGCT CCCCGCAGGC CGACGAGCCT CTGGCCGAAC GCGCCGCCCG CGCCGCGCTG CGCGCACGCA CCAGCGTCGG GCGCCTTTCG CTCACACCGC CGCAACAGGG CGGCTTTCAA CTACCGCCGA TCTGGGTGGT CAGCAGCCAG GTGGCCGATG CGCTGCTGGC TCCGAGCGGC CGCACCATCG CCGAGCTGCA GCAGCAGCTC GACGAAAGCC GCCAGCCCGT CGTCTTTGCC GTGCCTGCGG TCACCATCCA CGGCCGGCTC GTGCAGGAAA CCTACCAGGC GCAGACCGAG AACGTGCTGG CCTACATCGA AGGCGCCGAC TCGCTGCTGA AGCACGAAGT GGTGGTCCTC TCGTCGCATT ACGACCACGT GGGCGTCGAT CCGACGGCCG AAGGCGACGG CATCTACAAC GGCGCCGACG ACGACGGCAC GGGCACCGTC GCGCTGCTCG AAATCGCCGA AGCCTTCATG CAGGCCGCAC GCGACGGCTA CCCGCCTCGC CGCTCCATTC TGTTCCTGCA CGTGTCGGGC GAAGAAAAGG GCCTGCTTGG CTCGGCTTAC TACACCGATC ACGAGCCGGT CTTCCCGCTC GAACAGACCG TCACGAATCT GAATATCGAC ATGATCGGCC GCCACGACCC CACCCGGGAA GGCGATTCCA ACTACGTGTA CATCATCGGC TCGAACCTGA TTTCGCAGGA GCTGCACGAG ATCAACCTGC GCGTGAACGA AATCACCGGC ACGCGCCTCG TGCTCGACGA GCGCTTCAAC AGCAAGGACG ATCCGAACCG GTTCTACGCC CGCTCCGACC ACTGGAACTT CGGCAAGCAC GGCATTCCGT TCATTTTCTT CTTCACAGGT ACGCACGAAG ACTACCACGG CGTGGACGAC GAGCCGCACA AGATCGACTA CGACCGCATG GCGCGGATCG TCCGCCTGAT TTTCGGCACG GCCTGGCAGG TGGCCAACCA GGACAACCGC CCGGCCGTCA CGGGCACCGG CTTCAACTGA
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Protein sequence | MRQRIARTFF GVLLACWPLL SQAQSQRPAP TPTVFDQPAL VQRYQTTITP EDLAAHLFIV ASDYFEGRET TTRGQKLAAY YLASQYRKLG LEPAGTLKPD HPYAPEAYFQ PFTVYGQRLQ EAHLIAVQGA DTLAALAFGP EQADPNGYLW LGVRPESTGE LVFGGYGIAD PELGYNDYAA LAADSIDLVG RWLLILADEP LANDSTSLLT PDGRPSRWTT QPFLKLRRAL EAGVAGVILV GDRSPQADEP LAERAARAAL RARTSVGRLS LTPPQQGGFQ LPPIWVVSSQ VADALLAPSG RTIAELQQQL DESRQPVVFA VPAVTIHGRL VQETYQAQTE NVLAYIEGAD SLLKHEVVVL SSHYDHVGVD PTAEGDGIYN GADDDGTGTV ALLEIAEAFM QAARDGYPPR RSILFLHVSG EEKGLLGSAY YTDHEPVFPL EQTVTNLNID MIGRHDPTRE GDSNYVYIIG SNLISQELHE INLRVNEITG TRLVLDERFN SKDDPNRFYA RSDHWNFGKH GIPFIFFFTG THEDYHGVDD EPHKIDYDRM ARIVRLIFGT AWQVANQDNR PAVTGTGFN
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