Gene Rmar_0484 details

Gene Information

• Locus tag: Rmar_0484
• ID: 8567118
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 536778
• End bp: 537536
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 66%
• Product: CRISPR-associated protein Cas5 family
• Protein accession: YP_003289774
• Protein GI: 268316055

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.325433
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATCC TCCTGCTACG CTTCGATGCC CCACTGATGA GCTTCGGGGC GCCCATCGTG 
GATCAGTATG GATTTATCCA GCCCTATCCG GCGCTTTCCA TGATGACCGG CCTGCTGGCC 
AATGCGCTGG GCTACACGCA TGCCGAGACG GCCCGCCTGG AGCGTCTGCA GGAGCGCCTC 
CGCTACGCCG TGCGCGAAGA CCGACGCGGT CAGCAGCTGC GCGACTTTCA GACGGTGGAT 
CTATCGCAGC CGTTTCTGCA TGACGAGCGG GCCTGGACCA CCCGCGGTAC GCTGGAAACC 
CGCCAGGGCG GTACGGCCAG CCTCGGCATC CACATCCGCC TGCGCGACTA CTGGGCCGAC 
GCCGTCTATA CCGTCGCGCT CACGCTTGAC CCACCGGACG AGCCGCCCAC GCTGGCGGAT 
CTCGAACAGG CTCTCCGCTT TCCGGCGCGG CCGCTGTTTA TCGGCCGCAA GCCCTGTCTG 
CCGGCTGCGC CGCTTTTTAT CGGACGCGTG GAGGCGGCCG ATCTGCTGGA TGCGCTGCGA 
CGGGCGCCGC TGGACGCGCG GGCCGACCGC GCTGACTTCT ATCGGGTCTG GTGGGAGACG 
GGCCCTGACG ATCCGCCGCC CGTCGAAGGC ATTCGAGAAA ATCTGCGGCG GCCGGTTACC 
GACCGGCGTG ACTGGGCCAA CCAGATCCAC GTGGGCAGCC GCTGGATCGC CATGGGAGAA 
CTGTCCGTCC ATCCAGCCGG AGAACGTCAT GAAGGATAA 

 

Protein sequence

MEILLLRFDA PLMSFGAPIV DQYGFIQPYP ALSMMTGLLA NALGYTHAET ARLERLQERL 
RYAVREDRRG QQLRDFQTVD LSQPFLHDER AWTTRGTLET RQGGTASLGI HIRLRDYWAD 
AVYTVALTLD PPDEPPTLAD LEQALRFPAR PLFIGRKPCL PAAPLFIGRV EAADLLDALR 
RAPLDARADR ADFYRVWWET GPDDPPPVEG IRENLRRPVT DRRDWANQIH VGSRWIAMGE 
LSVHPAGERH EG