| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0480 |
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| Symbol | |
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| ID | 8567114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 530679 |
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| End bp | 533285 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_003289770 |
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| Protein GI | 268316051 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.227979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGGAG CCCCTTCGCC TGCTCAGTTC TGGGCCAAGC TCCGGTACAC GGAGGAGCGA
CACCCCGAAA ACATTGTGGC CTGGCATCCG CTGGTTGCCC ACGCGGCCGA CGTGGCGGCC
GTCGTCGAGG CCTTGCTGCA ACGCACGCTG CTTCGGAAAC GCCTGGCCCG ATTGATCGGG
TGGAACGACC TGGCGGAGGT GCACGTGGCC CGACTGGCCG TGCTGGCGGC GCTGCACGAT
GCGGGCAAAG CCAACCACGG CTTTCAGGAC CAGGCGTTCG ATCCTCGCGT GCGCAGCCCG
GGGCACGTGC GCCCCATCGT CGAGATCCTC TGCGCAGATG AACCGGCCCG GTGGCTGGAG
CCGCTCAAAA TAGGGGAAAT GGCGGGATGG TTCGTGTCGG AAGAAGTGTT CTACCACTTC
CTGTTGGCCA CCTGGTCTCA TCATGGCCGG CCGGTGCTGC CGGAAGGGGA TTTCCAGGCG
CACTACTGGC GCCCTAACGC GCGGCGCGAT CCTCGAGCGG CCTGGCGCCG TCTGGCCGAA
CTGGTGCGCC TGTGGTTCCC GGCGGCTTTT GCAGACGGTG CCGAACCATT TCCCGCAGAT
CCACGCTTTC AGCACGCGTT CAACGGTCTA TTGACACTGG CCGACTGGAT CGGTTCGGAC
ACGCGCTTCT TCCCCTATGC CGACGAGACG GCAGATCCGA TGTGTCCGAT CGAGCGGGCG
CGGGAGGGAG CACGGCGGGC ACTGCAGTCG CTGTTTCTGG ACGCTGCAGG CGGGCGCAAG
GCGCTGGGGG ACGTGCCCGT GGGATTCCGC GGGGTGATCG AAGCCGGTAC GCCCTATCCC
ATCCAGCAGG CCTGCTACGA CCTTCCGGTA CATCCGCAGG GGAGTCTGAC CATTCTCGAA
TCGGACACCG GTTCGGGCAA AACCGAGGCG GCCGTGGCCC GCTTTCTCCG GCTCTATCAG
GAGGGGCTGG TGGATGGGAT GTACTTCGCC CTGCCTACCC GCAGCGCGGC CTCGCAGATC
CACCGACGCA TTACCGAGAT CGTGGCCCGG GTCTTTCCGG AAGCCCATCG TCCTCCGGTG
GTGCTGGCCG TTCCGGGCTA CCTGCGCGTG GACGAGGCGG AGGCCGTTCG CCTGCCGGAC
TTTCGGGTAC TCTGGGACGA CGAGGCGCTA CGCTACCGCG GATGGGCGGC CGAGCATCCC
AAGCGCTATC TGGCCGGCCC CATCGTGGTG GGGACGATCG ATCAGGTGCT GCTCGCGGGC
CTTCAGGTCA GCCATGCCCA CATGCGGGCC GCCGCACTAC TTCGCCATTT TCTGGTAGTC
GACGAGGTGC ACGCCTCGGA CCCCTACATG ACGACCCTGC TGGAGCGGAT CCTGGCCTTT
CATCTGGCGG CGGGAGGGCA CGCGCTGCTC ATGTCGGCCA CCCTGGGTTC CGTGGCGCGC
GTGCGTTACG CGACGAAGGG CGGTACGCCA CCACCGCTCG ACGAGGCGGA AGGCGAGCGC
TACCCGTTGC TGACGCACGT GGATGCCGGC CGCCAGAGGC TCGAAACGGT ATCCGCCGCA
TCGTCCGGCC GGGAAAAGCC GGTGACGATT CGCGTGGAGT CCATCGCGTC CGATCCGCAG
GCTGTTGCCG AGCTGGCCCT GCAGCACGCT CGTGTCGGGG CGCGCGTGCT GCTCATCCGC
AACCGGGTGG AAGACTGTCT GGCCGTGCAG CAGGCCTTCG AGGAAGCGGC GTGCGACGAT
CGTTCGCTGC TGCTGACCTG CAACGGCCAG CCCGTTCCGC ATCATGGCCG CTACGCTCCG
GAAGATCGCC GGGCGCTGGA TGCCGCCATC GAGGCGGCCT TTGGCAAAAA CAGTCCGCGG
CGGGGCCTTG TGGCCGCCTG TACACAGACG GTGGAGCAGA GCCTGGATAT CGATGCGGAC
CTGCTGATCA CGGACCTGTG CCCGATCGAC GTGCTGCTGC AGCGTATCGG ACGGCTGCAT
CGCCACGAGC GCCCGCGGCC GAAAGGCTAC GAACAGGCCG TGTGTCTGGT GCTGACGCCG
GCGGAACGAG ATCTGACCCG GACCATCCAG CCCGACGGTG GGGCACGGGG ACCGCACGGC
CTCGGCACCG TGTATCCGGA CCTGCGGGTG ATCGAGGCGA CCTGGCGCGT GCTCGAAGGC
CAGAACCTGT GGCAGATCCC CCGCGACAAC CGCCGCCTGG TAGAACGCGC CACGCATCCG
GCCGTTTTGC AGCAGATCGT CCGGGAAAAA GGCGAACGCT GGGAGGCCCA TCAGCGCCAC
ATACTCGGAC AGGAAGCCGC CAATCGCTAT GTGCCCAAGA TTACAGGACT TCATTTCGAG
CGGCCGTTCG GGGCGCATCC ATTCGGCCGG GACATTGCGC CGCGTACTCG GCTGGGCGAC
GACGACTACC GGGTCGAGCT ACCGGAGCCG GTTCTGGGAC CGTTCGGCTG GCCTGTCGGA
ACGCTACCGG TGGCTTCCTG GATGGTCGGC GACGAGCTAC CGGAAGAACC GAAAGCCCGG
GACGTGACTC CGTTCGACGG CGGCTTCTCC TTTGTGTTCG CCGGAAGGCG GTTCCACTAC
GACCGCCTGG GCCTCCAGAT TGTCTAA
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| Protein sequence | MEGAPSPAQF WAKLRYTEER HPENIVAWHP LVAHAADVAA VVEALLQRTL LRKRLARLIG
WNDLAEVHVA RLAVLAALHD AGKANHGFQD QAFDPRVRSP GHVRPIVEIL CADEPARWLE
PLKIGEMAGW FVSEEVFYHF LLATWSHHGR PVLPEGDFQA HYWRPNARRD PRAAWRRLAE
LVRLWFPAAF ADGAEPFPAD PRFQHAFNGL LTLADWIGSD TRFFPYADET ADPMCPIERA
REGARRALQS LFLDAAGGRK ALGDVPVGFR GVIEAGTPYP IQQACYDLPV HPQGSLTILE
SDTGSGKTEA AVARFLRLYQ EGLVDGMYFA LPTRSAASQI HRRITEIVAR VFPEAHRPPV
VLAVPGYLRV DEAEAVRLPD FRVLWDDEAL RYRGWAAEHP KRYLAGPIVV GTIDQVLLAG
LQVSHAHMRA AALLRHFLVV DEVHASDPYM TTLLERILAF HLAAGGHALL MSATLGSVAR
VRYATKGGTP PPLDEAEGER YPLLTHVDAG RQRLETVSAA SSGREKPVTI RVESIASDPQ
AVAELALQHA RVGARVLLIR NRVEDCLAVQ QAFEEAACDD RSLLLTCNGQ PVPHHGRYAP
EDRRALDAAI EAAFGKNSPR RGLVAACTQT VEQSLDIDAD LLITDLCPID VLLQRIGRLH
RHERPRPKGY EQAVCLVLTP AERDLTRTIQ PDGGARGPHG LGTVYPDLRV IEATWRVLEG
QNLWQIPRDN RRLVERATHP AVLQQIVREK GERWEAHQRH ILGQEAANRY VPKITGLHFE
RPFGAHPFGR DIAPRTRLGD DDYRVELPEP VLGPFGWPVG TLPVASWMVG DELPEEPKAR
DVTPFDGGFS FVFAGRRFHY DRLGLQIV
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