Gene Rmar_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0358 
Symbol 
ID8566991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp398236 
End bp399561 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content67% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003289650 
Protein GI268315931 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGCC TCTTCCGACA TCGCTGCTGG ATCGGGCTGC TGGCCGGGGT GCTTCTGCTG 
GCCGGCTGTC ATCGTCCGGC ACCGACGCCC GTGCCGGAAA ACGGCAGGGT ACGGCTCGTC
TACTGGACGG CCCCCAATCC TGACGAGCTG GCACTGGCCC GTGAGCTGGT GGCCGAGTGG
ACGGCGGCCA ACCCGGACGT CGAGGTGATC GTGCAACCCA TCCCGGCCGG ACAGTCCAGC
GAGGAGGTGC TGCTGGCCGC CGTGGCCGCG GGCACGACGC CCGACCTGTG CTCGAACATC
TGGCCGGGCA TCGTCGAGGA TTTCGTCGAG GCCGGGGCGC TCGTGCCGCT GGATCGCTTC
CCGGACTTCG ACTCGCTGCT CGAAGCCCGC ATCCCCGAGA CGGTGCGCGA GCCGTTCCGC
TCACGCGACG GGCACTTCTA CCAGCTCCCC TGGAAGACGA ACCCCGTCAT GATGTTCTAC
AACGTGCAAC TGTTGCGGGA AGCGGGGTTC GAGCGGCCGC CGCGCACCTA CGGCGAGTAC
CTGGAAGCCG CCCGCCGCGT CACGGCCGAC ACCGACGGCG ACGGACTCAT CGACCGCTGG
ATGGGCTATC GCGACATCCG TCCGATCTGG TGGCAACGGT ACTTCGACTA CTATGCCTTT
TACATTGCCG CTTCGGGCGG GCGTACGCTC TTCGACCGAG AGGGTCGGCT GGCCGTCGAC
ACGGCCGCTT CGAACCGGGT GTTCGATTTC TTCGCCCGCC TGTATGCCAT GGGCGCCTTC
CCGAAGGCCG TCTGGACCAG CGCCGGAAGC CGCTTTCTGA AGGGCCAGCT CGCCACCGAT
TTCACCGGCC CCTGGCACCT GATCTGGCTG GAAAAACATG CACCACCGAC GCTGACCTAC
GACGTGGCGC CGATTCCCGT GCCGGACGAC CACGAAGGGC CGGTTTATAC CTACGGCGAC
TACAAGAACA TCGTGATCTT TTCGACGACG CGCCATCCGG ACGTGGCCTG GCGGCTGGCC
CGCTTTCTGG TGTCGCGCGA GGCCGACCGA CGGCTGCTGG AACGCACGCG CCAGATTCCC
GTGCGTCGGG GCCTGCTCGA CGATCCGTAC TTCGCGCCCG TGTTCGAGCG CTATCCGATC
CTCCGACGCT TTGCCGAACA GGCCGCCTAC ACGCGGAGCG TCGATAGTGC CCCTGATCTG
AAAGAAATCC TGGACGCGTT CGCGCAGGAG TTCGAGGCGG CCGCCGTCTT CGGCGTGCGC
TCGCCCGCCG AGGCGACCCG CCGCGCGTTG CGTCGCATTC AGATGATCCT GGACTGGAAT
GCCTGA
 
Protein sequence
MRRLFRHRCW IGLLAGVLLL AGCHRPAPTP VPENGRVRLV YWTAPNPDEL ALARELVAEW 
TAANPDVEVI VQPIPAGQSS EEVLLAAVAA GTTPDLCSNI WPGIVEDFVE AGALVPLDRF
PDFDSLLEAR IPETVREPFR SRDGHFYQLP WKTNPVMMFY NVQLLREAGF ERPPRTYGEY
LEAARRVTAD TDGDGLIDRW MGYRDIRPIW WQRYFDYYAF YIAASGGRTL FDREGRLAVD
TAASNRVFDF FARLYAMGAF PKAVWTSAGS RFLKGQLATD FTGPWHLIWL EKHAPPTLTY
DVAPIPVPDD HEGPVYTYGD YKNIVIFSTT RHPDVAWRLA RFLVSREADR RLLERTRQIP
VRRGLLDDPY FAPVFERYPI LRRFAEQAAY TRSVDSAPDL KEILDAFAQE FEAAAVFGVR
SPAEATRRAL RRIQMILDWN A