Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0355 |
Symbol | |
ID | 8566988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 391215 |
End bp | 393881 |
Gene Length | 2667 bp |
Protein Length | 888 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | TonB-dependent receptor |
Protein accession | YP_003289647 |
Protein GI | 268315928 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.66622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGAC TTGTAAAGCG TGGCACGGGC TGGATCGGGT TGCTCCTGCT GCTGAGTGCC CTGCCGCTCC GGGCGCAGAC GACAGGAAAG ATCGTCGGGC GCGTGACCGA CGCGCAGACC GGCGAGCCGT TGCCCGGCGT GAACGTGGTG ATCCTGGAGA CGCAGCAGGG CGCTTCGACC GATGCCGACG GCTACTACGT CATCCTGAAC GTGCGGCCGG GCACCTACAC GCTCCGGGCC TCCATGGTCG GCTTTACGCC GCAGGTGGTG CAGGAAGTAC GCGTGCAGAT CAACCTGACC ACCGAGGTCA ACTTCACGCT CCAGGAGGAG ACGATCACCG GCCAGGAGGT GGTGATCACG GCCACGCGCC CGCTGGTGCA GCGTGACCTG ACGGCCACGG CGGCGGCCGT CTCCCGCGAA GAGCTGGCCG TGTTGCCTGT GGAGAACTTC ACGGACGTGG TGAACCTGCA GGCGGGCGTC GTGGAGGGGC ATTTCCGGGG CGGCCGAATC GGGGAGGTAG CCTACCTGGT CGATGGCGTC CAGATCAACG ACGTGTACGA CCGTTCCTTT GCTTTTCAGG TCGAAAACAA CGCAATCCAG GAAATCGAGG TCATCACGGG CACCTTCAAC GCCGAGTACG GAAGCGCTCA GTCCGGCGTG GTCAACATCG TGACCCGCGA GGGAAGCGAG CGCTATCAGG GATCGCTGGG GGGCTATGTG GGCGACTACC TGACAACGGC CACCGACCTG TTCATGGGTC TGGAGCGCAT TTCGCCGCTT CATGCCCGCT CGATCCAGGG AGACCTGAGC GGTCCGCTGA TTCCGGGCTA TTCGAACGTG ACCTTCTTCG TGGCGGGGCG CTATGTGCAC AACGACGGCC ACCTGTACGG CCGCCGGATC GTGCTGCCGG TCGATCAGGA CGACCCGCGG GCGCAGTACG TGACGGTCGA TGGCCGCCAG GTCTTTGTGC CGGCGCTGGG CGACTCGGCG CTGGTGCCCA TGAACTGGAG TGAGCAGCAC ACGCTGCAGG CCAAGCTGAC AGCCCGCCTT TTCGGACAGC ACAAACTGAC GCTCAGCGGG CTCTGGCAGG GCGACCGGGG CAAGAACTAC AACCATCTGT TCCGCTACAA CCCGGACGGC ACCCCGACGG TCTATGGCCG CTCGCGCTCA TTGCTGGCCA CCTACACGCA CATCTTTTCA TCGCGCACGT TTGCCGAACT GAAAGGCGCC TATTTCACCA ATGAAGTCCG GGAGTACGTC TACGAAAATC CGCTGGACCC GCGCTATCCG CGGGACGATG CGTTGCGGCT GCTGGGCGGC AACTTCTCGT TCTACCGGGG CGGTGCCATC ATGCGGCATT TCCGGCGCAG GACCGAGACG TTTACGGCCC GCTTCGACAT CACAAGCCAG GTGACGCTAC GCCATCAGGT GAAGGCCGGC GTGGAGTTCA AACAGCACAC GCTGACGGTG CGCGACTTTG AGGTCAAGCG CAACCCGTCG ACGGGCTTCC AGCCGGCCAT TCCGCCCGTG CACACGCCCG ACCACGTCTA CTATCACAAA CGGCCGATCG AACTGAGCGC CTACGTGCAG GACAAAATGG AATTCGATTA TCTGGTCGTG AACGTGGGCC TTCGGTTCGA TTTCTTTGAT CCGCGCGCTG AGGTGCTGGA GGATTTCAGT CGGCCACGCA CGTCGCCGCG TCGTCCGGCC CCGGTGCGCT GGCAGCTTTC ACCACGACTG GGCCTGTCGT TCCCGATCAG TCAGAACGGC GCCGTGCGGC TGGCCTACGG GCATTTCTTC CAGATGCCCG CCTTCGACTA CCTGTACACG AACGCCGACT ACATCTACGA CCCGGAGCGG GGGCTGAGCC GGGCGTTCGG CTATGCCGGA CTGGAGCCCG AGCAGACTGT CGCCTACGAG ATCGGCCTGC AACAGGCGTT CTCCGAATTG ATCGGACTGA ATCTGGTGCT CTACTACAAA GACATTCGCA ATCTGCTGGG CACGCGTATC GAAGTGATTG CCCCGGGTTT TGATGAGCCG TTCCAGCTCG AAAAGTACGG CCGCTATGTG AACCGGGACT ACGGGCAGGT CAAGGGCTTT CTGGTGTCGC TGGAGCGTCG CATGGCCGGC GGTTTCGGAC TCGGCATTGA TTACACCTTC CAGATTGCCC GGGGCAATGC GAGTGATCCG CGGGCCGTGC TCATCGACGA AATGTCGGGG ATCGAGCCGG AAAAGCAACT GGTACCGCTC GACTGGGACC GGCGCCACCA GCTCAATACG AGCCTGACCG TGGGCGAAGC GGGGCGCTGG ACCGTGACGC TGGTGGGACG CCTGGGCTCC GGACTTCCCT ACACGCCGTC GATTGCTGAC GAACGCATCG GCGTGGAAAA CTCGGCCCGA CGGCCCGGCT TCGTACAGTT CGACCTGTAC GCCAGCCGTC TCTGGAAGCT CGGCTCCGTA GGGGTGCAGC TTTTCGCCCG GGTCTACAAC GTGTTCGACC ATCGCAATGA AATCCAGGTG TACACCGATA CCGGCCGCGC TTTCCCGAAC CTGCGCTACT ACTCCGGCGA GCCGCAGGGA TTGAATTCCA AGGAGGAATT CCTACGGCGG CCCGATTTCT ATTCGGCGCC GCGGCTGGTC AACATCGGCA TGAACGTAAC CTTTTAG
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Protein sequence | MTGLVKRGTG WIGLLLLLSA LPLRAQTTGK IVGRVTDAQT GEPLPGVNVV ILETQQGAST DADGYYVILN VRPGTYTLRA SMVGFTPQVV QEVRVQINLT TEVNFTLQEE TITGQEVVIT ATRPLVQRDL TATAAAVSRE ELAVLPVENF TDVVNLQAGV VEGHFRGGRI GEVAYLVDGV QINDVYDRSF AFQVENNAIQ EIEVITGTFN AEYGSAQSGV VNIVTREGSE RYQGSLGGYV GDYLTTATDL FMGLERISPL HARSIQGDLS GPLIPGYSNV TFFVAGRYVH NDGHLYGRRI VLPVDQDDPR AQYVTVDGRQ VFVPALGDSA LVPMNWSEQH TLQAKLTARL FGQHKLTLSG LWQGDRGKNY NHLFRYNPDG TPTVYGRSRS LLATYTHIFS SRTFAELKGA YFTNEVREYV YENPLDPRYP RDDALRLLGG NFSFYRGGAI MRHFRRRTET FTARFDITSQ VTLRHQVKAG VEFKQHTLTV RDFEVKRNPS TGFQPAIPPV HTPDHVYYHK RPIELSAYVQ DKMEFDYLVV NVGLRFDFFD PRAEVLEDFS RPRTSPRRPA PVRWQLSPRL GLSFPISQNG AVRLAYGHFF QMPAFDYLYT NADYIYDPER GLSRAFGYAG LEPEQTVAYE IGLQQAFSEL IGLNLVLYYK DIRNLLGTRI EVIAPGFDEP FQLEKYGRYV NRDYGQVKGF LVSLERRMAG GFGLGIDYTF QIARGNASDP RAVLIDEMSG IEPEKQLVPL DWDRRHQLNT SLTVGEAGRW TVTLVGRLGS GLPYTPSIAD ERIGVENSAR RPGFVQFDLY ASRLWKLGSV GVQLFARVYN VFDHRNEIQV YTDTGRAFPN LRYYSGEPQG LNSKEEFLRR PDFYSAPRLV NIGMNVTF
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