Gene Rmar_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0342 
Symbol 
ID8566975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp376144 
End bp378006 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content67% 
IMG OID 
Productribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 
Protein accessionYP_003289635 
Protein GI268315916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGG AAGTGCTACC GGATCTGGGC ACGCATTTTC ACGAGCCGGT CTCCTGGCAC 
GTCTGGGACG CGAAGTACCG CTATCGCGAA GGCAACGTCG TGCGCGATCA GACGATCGAG
GACACCTGGC GTCGGGTGGC CCGGGCGCTG GCGGCCGCCG AACCGGAATC GGAGCGGGCG
CGCTGGGCCG AGCGGTTCTA TCAGGTGCTC TACGGGTTCA AATTTCTGCC GGGCGGGCGC
ATTCTGGCCG GCGCCGGCAC GCGCCACCGC GTGACGCTTT TCAACTGCTT CGTGATGGGC
ATCATCGAAG ACTCGCTCGA CGGCATCTTC GACAGCCTCA AAGAGGGGGC GCTGACCATG
CAGCAGGGCG GGGGCGTGGG CTACGACTTT TCGACGCTGC GGCCGGCCGG GACGCGGGCG
CGCACGACGG GTACGATCGC TTCGGGACCG GTCTCGTTCA TGCACATCTG GGATGCCATG
TGCGCCACGC TGCTCTCGAC GGGCGCGCGG CGCGGCGCCA TGATGGCCAC GCTCCGGTGT
GACCATCCCG ACATCGAAAC CTTCGTTACG GCCAAACATC GGCCCGGCGT GCTCACGCAC
TTCAACCTGT CGGTGCAGGT CTTCGACGAA TTCATGGAGG CCGTGCGGCG CGACGCCGAC
TGGCCGCTGG TCTTTCCGGC CGCCGCGCTG GAGGACGAAG GCATGGGCGA CGGGCCGATC
GTTTACCGGC GCTGGACGGG CACCGACGGT CCCGTGCCCT GCCGCGTGCT CCGGGTGGTG
AAAGCGCGGG CGCTCTGGGA GCAGATCCTG CGCGCCACCT ACGACTACGC CGAGCCCGGC
GTGCTTTTTA TCGACACGAT CAACCGGATG AACAACCTCG CCTACCGTGA GCACATCACC
GCGACGAACC CCTGTGGCGA GCAGCCGCTG CCGCCCTACG GGGCCTGCGA CCTGGGTTCG
ATCAACCTGA CGCGCTTCGT GCGGGCGCCC TTTACGCCCG AAGCCGATCT CGACTGGGAG
GGGATCCGGG AGACCGTCGC CGTAGCCGTG CGCATGCTCG ACAACGTGAT CGACGTGTCG
GGCTTTCCGC TGCCGGCCCA GGCCGAGCAG GCCCGCGGCA CCCGGCGCAT CGGGCTGGGC
ATCACCGGAC TGGCCGACGC GCTGATCATG CTGGGCCTGC ACTATGCCTC GGAGGAGGCG
CGCCAGCTGG CCGCCCGCGT CATGCAGACG ATCTGCCACA CGGCCTACCG GACGTCCATT
GCACTGGCCC GCGAAAAAGG CGTCTTCCCC TTCTTCGAGC GGGAGCGTTA TCTGGAAAGC
CCCTTCATTC AGGCGCTCCC CGAAGACATT CGCAAAGGCA TCGCCACCTA CGGGATCCGG
AACAGCCACC TGCTTTCGAT CGCGCCCACA GGGACGATCA GTCTGCTGGC CAACAATGTG
TCGAGCGGCA TCGAGCCCGT CTTTGCCTAT CGCTACACGC GCTACATTCT GGGACTTGAT
GGCGAGCGGC GGGCCTACAC GCTTACCGAC TACGCCCTGC GGTTGTGGCA ACGGCTGCAC
GGCGACAGCG AGATGCTTCC CGAGGCGTTC GTCGATGCCC AGCACCTGGA CCCCTACGAT
CACCTGAAGA TGCAGGCGGC CCTGCAGCCC TACGTGGACG GGGCCATTTC AAAGACGGTG
AACGTGCCGG CCGACACGCC CTTCAATGCC TTCCGCCAGC TCTACGACTG GGCCTATGAT
CACGGCCTGA AAGGATGCAC CACGTACCGG CCCAGCCCGG TCCGGGGCGC CGTGCTGGAG
GCGATCACCG CCGGCGTAGC CGAAAGCACG CACTGCTGCA GCATCGAGCG CGAGGCCGAC
TGA
 
Protein sequence
MATEVLPDLG THFHEPVSWH VWDAKYRYRE GNVVRDQTIE DTWRRVARAL AAAEPESERA 
RWAERFYQVL YGFKFLPGGR ILAGAGTRHR VTLFNCFVMG IIEDSLDGIF DSLKEGALTM
QQGGGVGYDF STLRPAGTRA RTTGTIASGP VSFMHIWDAM CATLLSTGAR RGAMMATLRC
DHPDIETFVT AKHRPGVLTH FNLSVQVFDE FMEAVRRDAD WPLVFPAAAL EDEGMGDGPI
VYRRWTGTDG PVPCRVLRVV KARALWEQIL RATYDYAEPG VLFIDTINRM NNLAYREHIT
ATNPCGEQPL PPYGACDLGS INLTRFVRAP FTPEADLDWE GIRETVAVAV RMLDNVIDVS
GFPLPAQAEQ ARGTRRIGLG ITGLADALIM LGLHYASEEA RQLAARVMQT ICHTAYRTSI
ALAREKGVFP FFERERYLES PFIQALPEDI RKGIATYGIR NSHLLSIAPT GTISLLANNV
SSGIEPVFAY RYTRYILGLD GERRAYTLTD YALRLWQRLH GDSEMLPEAF VDAQHLDPYD
HLKMQAALQP YVDGAISKTV NVPADTPFNA FRQLYDWAYD HGLKGCTTYR PSPVRGAVLE
AITAGVAEST HCCSIEREAD