Gene Rmar_0220 details

Gene Information

• Locus tag: Rmar_0220
• ID: 8566850
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 232973
• End bp: 235090
• Gene Length: 2118 bp
• Protein Length: 705 aa
• Translation table: 11
• GC content: 67%
• Product: glycosyl transferase family 2
• Protein accession: YP_003289514
• Protein GI: 268315795

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGTGCG CGTCGTCCAT ATCCGCCCCT GCCGACCCGG TCACGCCGGA GTCCTGCGAC 
CTGTCGGTCA TCATCGTCAA CTACAACGTG CGCGACCTGC TCGAACAGGC GCTGCGCTCG 
GTCTTCCGGG CGGCAGACGG TCTTGAGCTG GAAGTCTTCG TGGTGGACAA CAACTCGGTG 
GACGGCTCCG TCGAGATGGT GCGTGCGCAT TTCCCCGAGG TACACCTCAT CGCCAATACC 
GAAAACGTCG GGTTCAGCCG CGCCAACAAT CAGGCGATCC GCCGGGCTCG CGGCCGCTAC 
CTGCTGCTGC TCAATCCCGA CACCATCGTG CAGGAAGATA CGCTGCGTGC GATGGTGGAC 
TTTCTGGACG CGCATCCCGA GGTGGGGGCG GCCGGCTGCA AGATCCTCAA CCCGGACGGC 
TCCTTCGCGC CGGAAAGCCG CCGGTCCTTC CCTACACCGG CCGTTGCCTT CTACCGCATG 
GTGGGGCTCA GCCGCCTGTT TCCACACAGC CGCCGTTTCG GTCGCTACAA CCTGACCTAC 
CTGTCGCCCG AGGTCGAAAC CGAAGTCGAC GCGCTCAGCG GCTCCTGCAT GTTCGTCCGG 
CACGCCGCCC TCTACTTTTC ACGCATGGCC TACGAGCGCC TGTGCCGAGA AGGCCTTGGC 
CCCACCGCGC ACCTGCTGCC CAACGGGTTG CAGCCGGACG GCGGCGCGGG CCTGCTCGAC 
GAAGACTTCT TCATGTATGG CGAAGACCTG GACTGGTGCT ACCGCATTCA GCAGGCCGGC 
TGGAAGATCG TCTATACGCC CCGCACGCAG ATCATCCACT ACAAGGGCGA AAGCACCAAA 
AAAGGCGAAC TGCGCTACGT GCGCCTGTTC TACGGGGCGA TGCTGCGGTT CGTCGAAAAA 
CACTTTCGCG ATCGGTACTC GCCGACCTTT CTGACTCTGC TGCGGCTCGG CATTGCCCTG 
CGGGCCGGGC TCTCGGCACT GCACCGGGGC GCGCGCCGGC TGGCTCCGCT GGTGATCGAC 
GGCCTGCTGA CCGCCCTGAT CGTCACGCTG GGCGGATGGC TGCGCTCGCT GGCGGCCGGA 
CGCCCTCTGG CCGCGCTCTT TCTGCTCAGC GTGGTGCCGG CCTATGCGCT GAGCACGGTA 
GCCGGCATTG CGCTGATGGG CGGCTACCGG CGCGGCCGCA TATGGCAATT GCGCCCGGTC 
TTCTACGGCA CACTGATCGG GCTGCTGTTC ATGGGTACGC TGTCGTTTCT GGTACCCGAC 
ATCGCATTCT CCCGGATGGT AGTGCTGCTG AGCGCGCCGT TCGCGCTGGC CGCACTGCTG 
GGCTGGCGAC TGGTGTGGCG TCGCCGCCAT GCCGCCCGGC TGCAGCGGGC GCTGCTGGTG 
GGCCCCACCG ACGAAGCCCG ACGCCTGCAC CGGCTACTTG AGGCCGCTCC CTGGCCTTCT 
TTTCAGCTCA TCGGATATGT ATCGCCGGAG CCGGACGGTA CGGATCAGGA GACACCCCCA 
CGACTGGGCG CGCTGCACCA CCTGCGCGAC CTGGTGCGAC TGCGCCAGGT GGATGCCGTG 
ATCTTCGCCA CGGCGGGCCT GTCGCACACC ACCGTGCTGC AGCTCATCCA GCAGCTGCGC 
GACCTGCCCG TGCAGTTCAA GATCCTGCCC GAAGGCCGCC CCCATGTGAT CGGCAAAGCG 
CACATCGAAA CGCTTGAGCC GCCCTCGCTC GTCGACGCCG AGGCCGCCCT GCCCACGCTG 
CGGAGCCTCC CCCTGGGCCG TGCGTTGGAG TGCGGGCTGG CACTGGTGGG GCTGATCCTG 
CGGCCGTTGC TGAAGGGAAT GGCCCGCCTG AGCGCCCGAC CCGGCCTGCG GCAACTGGTC 
CGGCGCCTCG ACGGCCTGCC CGACGTGCTA CGTGGACGCC GCACGCTCGT CGGCTGCCAC 
CCGGACGAAT GCGCGCTGCT GCCCGAGGGC TGGGGCATCC GGCCCGGCCT GTTTGCCGTC 
AGCGAAGCCC GCCCCACCCC GCCACGCACG CCGGAAGATA TTCGCCAACT TTATGCTTAT 
TATATGCAAC AGCGAACCGC CTGGCTGGAA CTGCGCCTGC TCCTGCAGGC CATCCGTCGG 
CTGCTGCAGA CAACCTGA 

 

Protein sequence

MSCASSISAP ADPVTPESCD LSVIIVNYNV RDLLEQALRS VFRAADGLEL EVFVVDNNSV 
DGSVEMVRAH FPEVHLIANT ENVGFSRANN QAIRRARGRY LLLLNPDTIV QEDTLRAMVD 
FLDAHPEVGA AGCKILNPDG SFAPESRRSF PTPAVAFYRM VGLSRLFPHS RRFGRYNLTY 
LSPEVETEVD ALSGSCMFVR HAALYFSRMA YERLCREGLG PTAHLLPNGL QPDGGAGLLD 
EDFFMYGEDL DWCYRIQQAG WKIVYTPRTQ IIHYKGESTK KGELRYVRLF YGAMLRFVEK 
HFRDRYSPTF LTLLRLGIAL RAGLSALHRG ARRLAPLVID GLLTALIVTL GGWLRSLAAG 
RPLAALFLLS VVPAYALSTV AGIALMGGYR RGRIWQLRPV FYGTLIGLLF MGTLSFLVPD 
IAFSRMVVLL SAPFALAALL GWRLVWRRRH AARLQRALLV GPTDEARRLH RLLEAAPWPS 
FQLIGYVSPE PDGTDQETPP RLGALHHLRD LVRLRQVDAV IFATAGLSHT TVLQLIQQLR 
DLPVQFKILP EGRPHVIGKA HIETLEPPSL VDAEAALPTL RSLPLGRALE CGLALVGLIL 
RPLLKGMARL SARPGLRQLV RRLDGLPDVL RGRRTLVGCH PDECALLPEG WGIRPGLFAV 
SEARPTPPRT PEDIRQLYAY YMQQRTAWLE LRLLLQAIRR LLQTT