Gene Rmar_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0182 
Symbol 
ID8566812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp196264 
End bp196827 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content67% 
IMG OID 
ProductPeptidoglycan-binding LysM 
Protein accessionYP_003289476 
Protein GI268315757 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAC GCCGGGGCTG GATCGTCGGA CTGGGATGGA CGCTGATCGT GGCGGGATGT 
GCTCCGTCGC CGGAGCATCC AGGTGCGTCG GCGGCGGAGC AGCCTCACCC GGTTGAAGCC 
GTGGACCCAC TGCCCTCGCA GCCTCTGCCG AAAGCATCGT TTTACATCCC CTCTGATACA 
GGCACGGTCG CCCGGCATGT GCGGGATCGG GCGCTGGCCG CGCAGGTGTT GCTGGCGCTG 
AGCGACGTGC CGGAATTGCG CGCGTATCTA CCGACGGTGA ACGTGCAGGA AGGCCGGGTT 
ACGCTGCGCG GTGTGGTACC GTCCGAGGCG CTTCGCCAGC GAATGGCACA GGTAGCCGCG 
CGTGTGCCCG GCGTAGAAGC GGTCCTGAAC GAACTGGAAG TAGAAGCCGC CGATGACGCA 
ACGGCCCGTT ACCACACGGT GGGGCCGGGT GAAACGCTGT GGGATATTGC GCGGCGCTAC 
GGCCTTTCGG TGACGGAACT CCGACGGCTG AACGGCCTGC GCACCGCCAC AATTCGGCCC 
GGGCAGCGGC TTCGCGTGCG ATAG
 
Protein sequence
MTERRGWIVG LGWTLIVAGC APSPEHPGAS AAEQPHPVEA VDPLPSQPLP KASFYIPSDT 
GTVARHVRDR ALAAQVLLAL SDVPELRAYL PTVNVQEGRV TLRGVVPSEA LRQRMAQVAA 
RVPGVEAVLN ELEVEAADDA TARYHTVGPG ETLWDIARRY GLSVTELRRL NGLRTATIRP 
GQRLRVR