Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0042 |
Symbol | |
ID | 8566666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 40554 |
End bp | 42062 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | 2-methylcitrate dehydratase |
Protein accession | YP_003289339 |
Protein GI | 268315620 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAAGC ATATTGTTCG CGTCTATTCC TCGAAGGAGC ATCTGCCGCG CGAGGAGCAA CTGGCCTGGA AGCTGGCCCG GGTGGCCACC GACGAGGCGC CCATCGACGA AGAGGCCGCC GCAATGGTGA TCAACCGGAT CATCGACAAC GCGGCGGTGG CCGTGGCTGC GTTGAACCGG CGGCCGGTCG CCAACGCCCG CACGCAGGCG CTGGCGCATC CCAATCCCGA AGGCGCCACG CTCTTCGGGC TGCCTTCGAC GCAGCGTTTC AGTTGCGAGT GGGCCGCCTG GGCCAACGGT GTGGCCGTGC GCGAGCTGGA CTTCCACGAT ACGTTCCTGG CCGCCGACTA CTCCCATCCG GCCGACAACA TCCCGCCCAT TCTGGCCGTG GCGCAGCAGA CCGGACGCAG CGGGGCCGAC GTGCTCCGAG GCATCCTGGC GGCCTACGAA GTGCACATCA GCCTGGTGAA GTCCATCTGC CTGCACAAAC ACAAGAAAGA CCACATCGCG CACCTGGCGC CGGCGGCCAC CGTGGGCATC GGTGCGCTGC TCGGGCTTCC CACCGAGATC ATCTACCAGG CGGTGCAGCA GGCCGTGCAC GTGTCGTTCC AGACCCGCCA GTCGCGTAAA GGGGAAATCT CGAGCTGGAA GGCCTACGCA CCGGCCTTTG CGGGCAAGCA GGCCGTGGAA GCGATCGACC GGGCCATGCG TGGCGAGACG TCGCCTTCGC CGATCTACGA GGGCGAAGAC AGCGTGATCG CCTGGATGCT CGACGGCCCC GACGCCGTCT ATGAGGTCTG GCTGCCCGAG CCGGGCGAGC CGCGCCGCCA GATTCTGGAA TCCTACACGA AGGAGCACTC CGCCGAGTAC CAGGCGCAGG CGCTGATCGA CCTGGCCTTC CGCATGCGGG AGAAAATCGA CGACTTCGAG AAGATCAAGG AAATCGTCAT CTACACGAGC CACCACACGC ACTACGTGAT CGGCTCCGGC TCGGGCGATC CGCAGAAGTA CGATCCGAAC GCCAGCCGCG AGACGCTCGA CCACAGCATC ATGTACATCT TCGCCGTGGC GCTGCAGGAC GGCACCTGGC ACCATGAGCG CAGCTACGCG CCCGAGCGGG CCCGGCGACC CGACACGGTG CGGCTCTGGC GGAAGATCCG GACCGTCGAG GATCCGGAAT GGACGGCCCG CTATCACCAC CCGGATCCGT CGAAAAAAGC CTTTGGCGGG CGTGTGGAAA TCACTTTCGA AGACGGGAGC AAGCTGGTCG ACGAGATCGA CGTGGCCAAT GCGCACCCGA ACGGCGCGCG GCCGTTCCGT CGTCCGGACT ACATCCGCAA GTTCGACACG CTCACCGAAG AGATCATCGA CCGCGCCGAG CGCGACCGCT TCCTGGGACT GGTCGAGCGC CTGCCCGAGC TGACGCCTGA AGAAGTGCTG GAGCTGAACG TCGTCGTACC CCGCGACTGG CTCACGCACG CCGAACGCGA CCGCCGGGGC ATTTTCTGA
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Protein sequence | MQKHIVRVYS SKEHLPREEQ LAWKLARVAT DEAPIDEEAA AMVINRIIDN AAVAVAALNR RPVANARTQA LAHPNPEGAT LFGLPSTQRF SCEWAAWANG VAVRELDFHD TFLAADYSHP ADNIPPILAV AQQTGRSGAD VLRGILAAYE VHISLVKSIC LHKHKKDHIA HLAPAATVGI GALLGLPTEI IYQAVQQAVH VSFQTRQSRK GEISSWKAYA PAFAGKQAVE AIDRAMRGET SPSPIYEGED SVIAWMLDGP DAVYEVWLPE PGEPRRQILE SYTKEHSAEY QAQALIDLAF RMREKIDDFE KIKEIVIYTS HHTHYVIGSG SGDPQKYDPN ASRETLDHSI MYIFAVALQD GTWHHERSYA PERARRPDTV RLWRKIRTVE DPEWTARYHH PDPSKKAFGG RVEITFEDGS KLVDEIDVAN AHPNGARPFR RPDYIRKFDT LTEEIIDRAE RDRFLGLVER LPELTPEEVL ELNVVVPRDW LTHAERDRRG IF
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