Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0025 |
Symbol | |
ID | 8566649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 23861 |
End bp | 24937 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | glycoside hydrolase family 5 |
Protein accession | YP_003289322 |
Protein GI | 268315603 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGTTC TGGCGCTGCT GCTTCTGCTG CTGGCGATTT CGGCCACGGC TCAGCCGCAG AAAGACAACT TCTACGACGA CCGGATCGAC ACCACGGCCA AGGCGCCCCC GAAGGAAACG CCCCGGACCT ATTCGCTTCC GTTCATTCGC GTGGAAGGCA ACCGTTTCGT GGATGAGCAG GGCCGCACCG TCGTGTTTCG GGGCGTGTCG ATTGCCGACC CCGACCGGCT TGAGCGGCTC GGCCGCTGGG ACAGGCGTAT CTTCGAAGTG CTCAAAAACG ACTGGAACGC CAACATCGTA CGCATTCCGG TGCACCCCCG GGCCTGGCGT GCGCGCGGCG AAGAAGCCTA CCTGAAACTG CTGGATCAGG CCGTCGAGTG GGCCAACGAA CTCGGACTCT ATCTGATCAT CGACTGGCAC TCGATCGGCA ACCTGCGCAC CGAGCTGTTC CAGCACCCCA TGTACAACAC GACGAAGACG GAAACCTTCC GCTTCTGGAA AACGATTGCC GAACACTTCC GCCACAATCC GATCGTGGCT TTCTACGAGG TGTTCAACGA ACCGACGCGC TACAACGGCA CGCTCGGCCG CATGTCGTGG GAGGAGTACA AACAGATCGT CGAGGACATC ATCTACATCA TCTACGCGCA CGACCGCACG GTCATCCCGC TGGTGGGCGG CTTCGACTGG GCCTACGACC TGACCTACGT GCGCGAAAGC CCGATCGCCT TCCCGGGCAT CGCCTACACG GCCCATCCGT ACCCGCAGAA ACGGCAACCC CCGTGGGAGG AAAAATGGGA GCACGACTGG GGCTTCGTGG CCGACACCTA TCCGGTCTTC GTGACCGAGC TGGGCTTTAT GAGCGCGGAC GAGCCCGGCG CGCACGTGCC GGTCATCGGC GACGAGACCT ACGGGGAAGC CATCGTCAAC TACATGGAAA AGAAGGGGAT TTCCTGGACG GCCTGGGTGT TCGATCCGGT CTGGTCACCC CAGCTCATCA AAAACTGGGA CTTCGAGCCC ACCACGCAGG GCCGCTTTTT CCGGGAGAAA ATGCGCCAGC TCAACCCGCG AAACTAA
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Protein sequence | MRVLALLLLL LAISATAQPQ KDNFYDDRID TTAKAPPKET PRTYSLPFIR VEGNRFVDEQ GRTVVFRGVS IADPDRLERL GRWDRRIFEV LKNDWNANIV RIPVHPRAWR ARGEEAYLKL LDQAVEWANE LGLYLIIDWH SIGNLRTELF QHPMYNTTKT ETFRFWKTIA EHFRHNPIVA FYEVFNEPTR YNGTLGRMSW EEYKQIVEDI IYIIYAHDRT VIPLVGGFDW AYDLTYVRES PIAFPGIAYT AHPYPQKRQP PWEEKWEHDW GFVADTYPVF VTELGFMSAD EPGAHVPVIG DETYGEAIVN YMEKKGISWT AWVFDPVWSP QLIKNWDFEP TTQGRFFREK MRQLNPRN
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