| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_7234 |
|---|
| Symbol | |
|---|
| ID | 8022940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | + |
|---|
| Start bp | 660080 |
|---|
| End bp | 660973 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644834066 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002985200 |
|---|
| Protein GI | 241667116 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0446957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTATG CTTCGGCGAC CGAACCGCTC AGGGCGGCAA ATCTTTTGGC CGGACGCGAG
ATCTATCGAC TGCAGATCTT CTCGCCCGAT GGCACGCCGG CGCTCTCCTC CTCGGGCACA
AGCGTCCCCG CCGAGCCTCT CCCGGTCAGG GGCTCGGGGC TCGGAACGGC CTTCGTCTGC
GCCGGCGGCT TGCCCCGCGA CTGGCGGTAC CCCGGCGTAC TTGCCTGCTT GCGGCAGCTG
TCGCGCGAAG GGGTGAGGAT CGGCGGCATC TCGGGTGGCC CCTATCTGAT GGCCGCCGCC
GGACTGCTTG GCGGCCGCGA CTTCACCATC CACTGGGAGC ATGCGGCCGC CCTTCTCGAA
GCCTTCCCGG ACCTGACGCC GCGCCAGGCG CGCTTCGTGA TCGACGGCAA CCGGATCACC
TGCGGCGGCG GCATCGCACC GCTCGACATG ATGCATGTGC TGATCGCCGA GCGCATGGGG
CCGGATTTCG CCCGCCGGGT CAGCGACTGG TATCTGCACA CCGAGGTCAA CGAGCCCGCT
GCACCCCAGC GCGCCTCGCT GGCGCAGCGT TACGGCGTCC ATCATTCCGG CCTGCTCAAC
GTTCTCGAAC GGATGGAAGA GACGATCGAG ATGCCGCTCG AGCGTGCCGC CATGGCGCGC
ATCGCCGGCG TCACCACCCG CCATCTCGAC CGGCTCTTTT CGGCCCATCT CGGCACCACC
TTCCTCGATC AGTACCGCAG GATCAGGCTG CAGCATGCCC ATCGCCTGCT GAAGCAGAGC
CCGCTTTCCG TCTCGGAAAT CGCGGTGGCC ACCGGTTTTT CCAGTCTGAG CCATTTTTCC
CGGATGTTCC GTGCCGTCTA CGGCATCGCT CCGCGCGCGG CGCGGCGGGA ATAG
|
|---|
| Protein sequence | MSYASATEPL RAANLLAGRE IYRLQIFSPD GTPALSSSGT SVPAEPLPVR GSGLGTAFVC
AGGLPRDWRY PGVLACLRQL SREGVRIGGI SGGPYLMAAA GLLGGRDFTI HWEHAAALLE
AFPDLTPRQA RFVIDGNRIT CGGGIAPLDM MHVLIAERMG PDFARRVSDW YLHTEVNEPA
APQRASLAQR YGVHHSGLLN VLERMEETIE MPLERAAMAR IAGVTTRHLD RLFSAHLGTT
FLDQYRRIRL QHAHRLLKQS PLSVSEIAVA TGFSSLSHFS RMFRAVYGIA PRAARRE
|
|---|
| |