Gene Rleg_6728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6728 
Symbol 
ID8022638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp159856 
End bp160638 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID644833595 
ProductABC transporter related 
Protein accessionYP_002984729 
Protein GI241666645 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTTT CCGCAATTGA AACTCAGGAA AAGCCGCGGG TGGTGTTGTC CGCCCGCGGC 
CTGCGCCGTG ATTTCGGCGG CTTCACCGCC GTCAAGAATG TCGATCTCGA CGTGCATGAC
GCAAGTGTGC ATGCGCTGAT CGGCCCGAAT GGCGCCGGCA AGACGACGGT CTTCAATCTG
CTGACGAAGT TCCTGCAGCC GACCTCAGGC ACGATCACGC TGATGGGCAC CGATATCACC
AAGACGCCGC CCGACAAGGT GGCGCGCATG GGGCTGGTCC GCTCTTTCCA GATCTCGGCG
GTCTTCCCGC ATCTGACCGT TCTCGACAAT GTGCGTGTGG CGCTGCAGCG ACCGAACAAT
CTTTCCACGC AGTTCTGGCG GCCGATTTCG GCGCTCGACC GGCTGAACGG GCGCGCCGAG
CAATTGCTGG CCAGCGTCGG GCTTTCCAAG GAGCGTGACC ATATCGCCGC CGATCTTTCC
TATGGCCGCA AGCGCGTGCT GGAGATCGCG ACAACGCTGG CGCTGGATCC GAAAGTGCTG
CTGCTCGACG AGCCGATGGC CGGCATGGGG CAGGAGGATG TCGGCGTCGT TTCCTCGATC
ATCCGCGAGG TCGCCCGCGA CCGCGCCGTG TTGATGGTCG AACACAATCT CTCCGTCGTC
GCCAATATCT GCCAGCACGT CACCGTGCTG CAGCGCGGTG AGATCCTCGC CGCGGGCGAT
TATGCCACCG TCAGCCAGGA TGAGCGCGTA CGCGTGGCCT ATATGGGCAC GGAGGAGCAT
TGA
 
Protein sequence
MAVSAIETQE KPRVVLSARG LRRDFGGFTA VKNVDLDVHD ASVHALIGPN GAGKTTVFNL 
LTKFLQPTSG TITLMGTDIT KTPPDKVARM GLVRSFQISA VFPHLTVLDN VRVALQRPNN
LSTQFWRPIS ALDRLNGRAE QLLASVGLSK ERDHIAADLS YGRKRVLEIA TTLALDPKVL
LLDEPMAGMG QEDVGVVSSI IREVARDRAV LMVEHNLSVV ANICQHVTVL QRGEILAAGD
YATVSQDERV RVAYMGTEEH