Gene Rleg_6704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6704 
Symbol 
ID8022614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp133053 
End bp133922 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content67% 
IMG OID644833571 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002984705 
Protein GI241666621 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.537136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.311682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGA AAAAATGGCT GACTGAAGAA TTCGAGGCGA ACAGAGCGCA TCTGAGGGCC 
GCAGCCTTTC GCATGCTCGG CTCGCGCAGC GAGGCGGAGG ATGCCGTTCA GGAGGCCTGG
CTGCGGCTTA GCCGCACCGA TACGACAGGG GTCGGCAATC TCGGCGGCTG GCTGACGACG
GTGGTGGCGC GCATCTGCCT CGACATGCTG CGCGCCCGCA AGACCCGGCG CGAGGAGCCG
CTGGAGGTGC CCGACCATGG CGGGATCGCC GATCCGGCGA ACGATCCCGA GCGCGAAGCC
GCCTTCGCCG ATTCGGTCGG TCTGGCGCTG CTCGTCGTGC TGCAGACGCT GGCGCCCGCC
GAACGTGTCG CCTTCGTGCT TCACGACATG TTCGATCTGC CCTTCGACGA GATCGCGCCG
ATCATCGGCC GTTCGTCCGC CGCTACCCGC CAGCTTGCAA GCCGCGCCCG CCGCCGGGTG
CAGGGGGTGG ACGAAGCGCC AGATGTCGAT TTCGGCCATA AGCGGACGAT CGCCGAGGCC
TTTCTGACAG CCTCGCGCAA CGGCGATCTG GAGGGATTGA TCGCGGTGCT TGCCCCCGAC
GTCGTCTTCC GGCCGGATGC GACGGCCGCC CGCTTCGGCA CCATTGGCGA AATGCGCGGC
GCAACTGACG TGGCCGAAGC CTTCAAGGGT CGGGCGCAGG CAGCCGAAAT CGCCATCGTC
GGCGGTGAGC TTGGGTTCGT CGTGGAGATC CAGGGCCAGC TCCGCGTCGT CGTGGCGCTG
ACGATCGCCG ATGGCAGGAT CGCCGCGATC GACGCCATCG CTGATCCGGA GCACCTGGAA
AGGCTCGACT ATTCGATCCT TGGGGATTGA
 
Protein sequence
MDEKKWLTEE FEANRAHLRA AAFRMLGSRS EAEDAVQEAW LRLSRTDTTG VGNLGGWLTT 
VVARICLDML RARKTRREEP LEVPDHGGIA DPANDPEREA AFADSVGLAL LVVLQTLAPA
ERVAFVLHDM FDLPFDEIAP IIGRSSAATR QLASRARRRV QGVDEAPDVD FGHKRTIAEA
FLTASRNGDL EGLIAVLAPD VVFRPDATAA RFGTIGEMRG ATDVAEAFKG RAQAAEIAIV
GGELGFVVEI QGQLRVVVAL TIADGRIAAI DAIADPEHLE RLDYSILGD