Gene Rleg_6685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6685 
Symbol 
ID8022595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp116710 
End bp117687 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content62% 
IMG OID644833552 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002984686 
Protein GI241666602 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0249193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.645834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCC TGCTTCGCCG CCTCGTCTTC TACATGGCAG CCTTCATCGC GGCAGCGACG 
ATCAATTTCT TCCTGCCGCG GCTGATGCCC GGCGATCCCG TGCAGATCAT GTTTTCCAGC
GCCGGCACCG AATTGCCGCC GGAAAGCCTG CAGGCGCTGA AGCTCACCTT CGGCTTCGTC
GACGGTCCGC TCTGGCAGCA GTACCTCACT TATCTCGGCA GCATCTTCAC CGGCGATCTC
GGCCGCTCGA TCAAATATTT TCCGCTGCCG GTCACCTCGG TGCTCGGCCA TGCGCTGGTC
TGGACCGTCG GCCTGATGGG CACGGCGACG ATCGTCAGCT TTGCGCTCGG CACCTTCCTC
GGCATCGTCG CCGCCTGGCG CCGTGGCAGC CAGTTCGATG TCGTCGTCTC CGTCGGCGCG
ATCTTCGCAA CCTCGGTACC AGCCGTCGTC ACCTCGCTGA TCGTGCTCTT CATCTTCGGC
TTCACGCTCG GCTGGTTTCC GAACGGTTAT GCCGCCGACC CATCGCTCGA TCCGGCCTTC
AGCCTGCAAT ATATCGGCAG CCTCGCCTAT CACGGCATCC TGCCGATGGT GACGCTCTGC
ACCGTGCTGA TCGGCGGCTT CACCGTCACC ATGCGCAACA ACATGATCAA CCTGCTCGGC
GAGGATTATA TCGTCATGGC CCGCGCCAAG GGCCTTTCCG ACCGGCATGT GATGCTCTGG
TACGCTGCGC GCAACGCCCT GCTGCCGACC GTCTCCAGCC TTGCCATCGC CATCGGCACC
ATCCTCGGCG GCTCGCTGGT GACGGAGGTC GTCTATAACT ACCCCGGCCT CGGCAACATT
CTCTACCAGG CGATCCTCGC CCGCGATTAC CCCGTCATTC AGGGCCAGCT CCTCATCATG
ACCGCGACCA TGCTGATCGC CAATTTTATC GTCGACGTCA GCTATGTGCT GCTTGACCCG
CGGCTGAAGG GAGCGTGA
 
Protein sequence
MAFLLRRLVF YMAAFIAAAT INFFLPRLMP GDPVQIMFSS AGTELPPESL QALKLTFGFV 
DGPLWQQYLT YLGSIFTGDL GRSIKYFPLP VTSVLGHALV WTVGLMGTAT IVSFALGTFL
GIVAAWRRGS QFDVVVSVGA IFATSVPAVV TSLIVLFIFG FTLGWFPNGY AADPSLDPAF
SLQYIGSLAY HGILPMVTLC TVLIGGFTVT MRNNMINLLG EDYIVMARAK GLSDRHVMLW
YAARNALLPT VSSLAIAIGT ILGGSLVTEV VYNYPGLGNI LYQAILARDY PVIQGQLLIM
TATMLIANFI VDVSYVLLDP RLKGA