Gene Rleg_6672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6672 
Symbol 
ID8022582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp102738 
End bp103871 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content65% 
IMG OID644833539 
ProductABC transporter substrate binding protein 
Protein accessionYP_002984673 
Protein GI241666589 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0124966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.374205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACG CGCTGAAAAT CGGTATCCTC TATTCGACCA CCGGACCTTA CGGCTCGATG 
GGCCGCGACG CGCGCGATGG CGCCGATTTC GCGATGGCCG AATATGGCGG CGTCGAAGGG
CTGGCGATCG AACCCGTCTT CTTCGATCCG CATGCCGATC TTGCCGCCTA TCTCGATGGC
GCGCGCCATC TTCTGCGCGC CGGCTGCCGC CATATCGTCG GAACGATCAC CTCTGCGGCA
CGCAAGGAAG TCATCCCGCT CGTCGAGAAA CATGACGGCC TGCTCTGGTA CATGTGCCCC
TATGAAGGCT TCGAGGCCAA CGAGAACGTC ATCTATGTCG GCGGCTGCCC GAACCAGCAT
CTGCTGCCGC TTTTCGAGCA CCTGATCCCG CGTTACGGGG CAAGGCCCTA TCTCGTCGGC
GCCAACTATG TCTGGGGCTG GGAGATGAAC CGGCTCGCCC GCGAACTGAT TACCAATGCC
GGCGGCGAGG TGCTTGGCGA ACGCTATCTT CCGCTCGAGG AAACCGCGGT CGAGCGCATC
GTCGCCGAGA TCGCGCAGCG CCGCCCGAGC TTCATCCTCA ACAATCTGAT CGGCCCCTCG
AGCTACGCCT TCCTGGAGGC GATCAAGGCC CTCGGTGATC GCGACCCGGC CTTCCGGGCG
GAAAACTGCC CGGTCGTGAG CTGCGACCTG ATGGAATGCG AGCTCGACGA TATCGCCGCC
GGAGCCGCCG CCGGCCAGCT TTGCGCCGCT TCCTATTTCG ACAGTATCGC GACCCCCGAA
AATGCCGCCT TCAAGGCACG CGTCACTGAG CATCACGGCG CCGAGCGGCG TGTCTCCAGC
GTTTTTGCCA GCGCCTATAC GGCCGTCCGG CTCTGCGTCG ACGCGATCGT CGCTGCCGGC
GGTGACGAGC CCGACGCCGT CCGGCGCGAG CTCTACAATC GATCCTGGCC GACCCTGTTC
GGCGCGCTTT CGATCGACCG CGAGACCAAT CATGCCGCCC TGCCCTTCCA TCTCGGCCGG
ATCAACGCCG ACAACGGCTT CGATGTCGTC GCCTCGCGGC CGCCGCTCGC CGCCGACCCC
TATCTGACCG GCCGCAACCG GCAGGCCTTT CCGCGGCTGA GGGTGGTGTC ATGA
 
Protein sequence
MNDALKIGIL YSTTGPYGSM GRDARDGADF AMAEYGGVEG LAIEPVFFDP HADLAAYLDG 
ARHLLRAGCR HIVGTITSAA RKEVIPLVEK HDGLLWYMCP YEGFEANENV IYVGGCPNQH
LLPLFEHLIP RYGARPYLVG ANYVWGWEMN RLARELITNA GGEVLGERYL PLEETAVERI
VAEIAQRRPS FILNNLIGPS SYAFLEAIKA LGDRDPAFRA ENCPVVSCDL MECELDDIAA
GAAAGQLCAA SYFDSIATPE NAAFKARVTE HHGAERRVSS VFASAYTAVR LCVDAIVAAG
GDEPDAVRRE LYNRSWPTLF GALSIDRETN HAALPFHLGR INADNGFDVV ASRPPLAADP
YLTGRNRQAF PRLRVVS