| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6655 |
|---|
| Symbol | |
|---|
| ID | 8022565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | + |
|---|
| Start bp | 86167 |
|---|
| End bp | 86658 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644833522 |
|---|
| Product | Uracil-DNA glycosylase superfamily |
|---|
| Protein accession | YP_002984656 |
|---|
| Protein GI | 241666572 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00584] mismatch-specific thymine-DNA glycosylate (mug) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.36205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.066792 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCGGAGA TCCTCGCTCC TGGCCTTTCC GTGGTTTTCT GCGGATTGAA TCCGGCTCTG
TCCGCGGTTC GCGACGGCCA TAATTTCTCG AACCCGAGCA ACCGTTTTTG GCGGGTCTTG
CATCTAGCCG GATTTACACC GCGTCTGCTG CGGGCGGATG AAGAGCGCGA GCTGCTGCAA
TATGGCTGCG GTCTGACATC CGCGGTGTCA CGTCCTACGA AAAGCGCAAG CGAGCTCAAG
AAGCAGGACT ATCGCAGCGC CGCGCCCGTC CTGGAAAACA AGATACGAAA GATTGCGCCA
GCCAATTTGG CCTTTCTCGG AAAGGCGGCA TACGCGGCGA TCAGTCTTCG AGCCGATGTT
GAATGGGGTC GGCAGCCTGA GGTATTTGCC GGCGCAGACG TCTGGCTGTT GCCAAATCCG
AGCGGCCTCA ACAGAGCCTT CACCTTGACG ACATTGACCG AACACTATCT CGACCTGAGA
TTGACGCTGT AG
|
|---|
| Protein sequence | MSEILAPGLS VVFCGLNPAL SAVRDGHNFS NPSNRFWRVL HLAGFTPRLL RADEERELLQ
YGCGLTSAVS RPTKSASELK KQDYRSAAPV LENKIRKIAP ANLAFLGKAA YAAISLRADV
EWGRQPEVFA GADVWLLPNP SGLNRAFTLT TLTEHYLDLR LTL
|
|---|
| |