Gene Rleg_6534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6534 
Symbol 
ID8017057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp252149 
End bp252976 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content57% 
IMG OID644828321 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002979521 
Protein GI241554308 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0138063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGCG TCCGCCCTTA CGTGACCGGC GCGATAGCCC TTGCGGCGGC GGCCGTCATC 
TTCGTCATGC CCTTCGTTTT CGTCGCTCTG CAGGCGGTCA AATCGAAATC CGAAGCGTCT
CGCCTTAATT TCGAATTGCC TGCGCAGTGG CTGTTCTGGG ATAATCTGGT CGCCGTTTTC
AAGGCGCGCG ACTACCAGCT CATGCTCGCC TATTTCAACT CCACCCTGAT CACCGTCGCC
TCCGTCACGA TCCTGATCCT GCTGTCGGCA ATGGTCGGAT ATGTGATGCA GCGCCGCAGG
ACCGTCTGGA ACAGAGTGGC CTCCGTTGCC CTATTCATGG GCCTGATGAT GCCGCCGGCC
GTCGTGCCCA CCATCGGCCT CTTGCAGGAG ATCGGTCTCT TCAAGACCAT GACGGGGATG
ATCCTGATCC AGGTCGCCTA TAATCTTTCT TTCTCAACCT TGCTCTACCG GTCGTTCATC
TCGACCATAC CGCGCGACCT CGACGAAGCG GCGCTGATCG ACGGCGCCAA GCCCCGACAG
ATCTTCTTCA GAGTGATCTT GCCGCTGTTG AAGCCGGTGA CCGTCACCAA CATCGTCGTC
CAATCCATTG CGATCTTCAA CGATTTCACC AACCCGCTCT ACTACCTTCC CGGCAAGGAG
AACGTGACGG TGCAGCTGAC GCTCTATAAC TTCCAGAGCA TGTACACGAG CCAGTACAAT
CTCCTCTTCA TGAACATCCT CCTCGTGACG ATCCCGCCGC TGATCGTCTT CATCTTCTTC
AACAGGCAGA TCGTCGCGGG CATGACGGCC GGCGCAGTCA AAGGGTAG
 
Protein sequence
MRSVRPYVTG AIALAAAAVI FVMPFVFVAL QAVKSKSEAS RLNFELPAQW LFWDNLVAVF 
KARDYQLMLA YFNSTLITVA SVTILILLSA MVGYVMQRRR TVWNRVASVA LFMGLMMPPA
VVPTIGLLQE IGLFKTMTGM ILIQVAYNLS FSTLLYRSFI STIPRDLDEA ALIDGAKPRQ
IFFRVILPLL KPVTVTNIVV QSIAIFNDFT NPLYYLPGKE NVTVQLTLYN FQSMYTSQYN
LLFMNILLVT IPPLIVFIFF NRQIVAGMTA GAVKG