Gene Rleg_6420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6420 
Symbol 
ID8016919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp134226 
End bp134750 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content63% 
IMG OID644828215 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002979415 
Protein GI241554202 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.562422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGCGG AGCTCATAGA ACGAGCGCAG GGCGGCGACC GGGAGGCCTT CGGGCAACTG 
GTGTCGCGCC ATTATGATTT CGTCCATGCG ACGGCGTGGC GGTGGTCTGG CAGTTCCACG
GATGCCGACG ACATCGCCCA GGAGGTCTGC GTCAAGCTCG GCGCAGCCAT CCGCAGCTTT
CGCGGCGCCA GCCGCTTCAG GACATGGCTT TATACTCTGA CGCTCAATGC CGCCCGTGAC
CATAGACGCA AGCTTGCACG AGAGGAGCAG ACATTCCGCG CCTACGCTGT CGAACCGCAG
CCCGATGCGC CGGCCGCAAA TGACGATGAG CTATCGAGCG AATTATGGGC AGCCGTGCGC
GCCTTGCCGG ACAGGCAATG CGACGCAGTG CTGCTCGTTT ACGGCGAAGG TCTCAGCCAT
TCGGCTGCCG CCGATGTCAT GGGCTGCTCG GAGGCGACTG TGTCCTGGCA GGTTCATGAA
GCGCGCAAGA GGCTGAAGGC CGTGCTCGGC AAGGAAGAGG TATGA
 
Protein sequence
MDAELIERAQ GGDREAFGQL VSRHYDFVHA TAWRWSGSST DADDIAQEVC VKLGAAIRSF 
RGASRFRTWL YTLTLNAARD HRRKLAREEQ TFRAYAVEPQ PDAPAANDDE LSSELWAAVR
ALPDRQCDAV LLVYGEGLSH SAAADVMGCS EATVSWQVHE ARKRLKAVLG KEEV