Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6420 |
Symbol | |
ID | 8016919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | - |
Start bp | 134226 |
End bp | 134750 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644828215 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002979415 |
Protein GI | 241554202 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.562422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACGCGG AGCTCATAGA ACGAGCGCAG GGCGGCGACC GGGAGGCCTT CGGGCAACTG GTGTCGCGCC ATTATGATTT CGTCCATGCG ACGGCGTGGC GGTGGTCTGG CAGTTCCACG GATGCCGACG ACATCGCCCA GGAGGTCTGC GTCAAGCTCG GCGCAGCCAT CCGCAGCTTT CGCGGCGCCA GCCGCTTCAG GACATGGCTT TATACTCTGA CGCTCAATGC CGCCCGTGAC CATAGACGCA AGCTTGCACG AGAGGAGCAG ACATTCCGCG CCTACGCTGT CGAACCGCAG CCCGATGCGC CGGCCGCAAA TGACGATGAG CTATCGAGCG AATTATGGGC AGCCGTGCGC GCCTTGCCGG ACAGGCAATG CGACGCAGTG CTGCTCGTTT ACGGCGAAGG TCTCAGCCAT TCGGCTGCCG CCGATGTCAT GGGCTGCTCG GAGGCGACTG TGTCCTGGCA GGTTCATGAA GCGCGCAAGA GGCTGAAGGC CGTGCTCGGC AAGGAAGAGG TATGA
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Protein sequence | MDAELIERAQ GGDREAFGQL VSRHYDFVHA TAWRWSGSST DADDIAQEVC VKLGAAIRSF RGASRFRTWL YTLTLNAARD HRRKLAREEQ TFRAYAVEPQ PDAPAANDDE LSSELWAAVR ALPDRQCDAV LLVYGEGLSH SAAADVMGCS EATVSWQVHE ARKRLKAVLG KEEV
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