Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6414 |
Symbol | |
ID | 8016913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | - |
Start bp | 126854 |
End bp | 127618 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644828209 |
Product | gluconate 5-dehydrogenase |
Protein accession | YP_002979409 |
Protein GI | 241554196 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0118789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.389185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAACT TGTTCGATCT TACCGGACGG CGTGCGCTGA TCACCGGCTC GAGCCAGGGG ATCGGCTATG CCCTGGCCGA AGGCCTGGCG CAGTATGGCG CCCAAGTCAT CATCAACGGC CGCACGCCCG AAAGCGTCAA CCGCGCGGTC GAGAGCCTGA AGGATCAAGG CCTGTCTGCC CATGCGGCGA TCTTCGACGT GACCAGCAAG GACGCTGCCA AAGCGGGTAT CGACGCGATC GAAGCCGATA TCGGTCCGCT CGACATCCTG ATCAACAATG CCGGCATGCA GTTTCGTACG CCGCTGGAAG ATTTCCCGGC GGACAAATGG GAGCTGCTGC TGACCACCAA TATTTCGAGC GTATTTTATG TCGGCCAGGC AGCGGCCAAA CCCATGATCG CCCGCGGACA GGGCAAGATC ATCAACATCG CCTCCGTGCA AAGCGAACTG GCGCGCCCCG GCATTGCTCC CTATACGGCG ACCAAGGGCG CGGTGCGCAA TCTGACCCGC GGCATGTGCG CCGACTGGGC CAAGTACGGC CTGCAGATCA ATGCGATTGC GCCGGGCTAT TTCAAGACGC CGCTCAATCA GGCGCTTGTC GACAATCCCG AGTTCTCGTC CTGGCTCGAG AAGCGAACGC CGGCCGGACG CTGGGGCAAT GTCGACGAAC TGGTCGGCGC CGCCGTTTTC CTGTCGGGCC GGGGCTCGTC CTTCATCAAC GGGCACACGC TTTATGTCGA CGGCGGCATC ACGACCTGCC TCTGA
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Protein sequence | MKNLFDLTGR RALITGSSQG IGYALAEGLA QYGAQVIING RTPESVNRAV ESLKDQGLSA HAAIFDVTSK DAAKAGIDAI EADIGPLDIL INNAGMQFRT PLEDFPADKW ELLLTTNISS VFYVGQAAAK PMIARGQGKI INIASVQSEL ARPGIAPYTA TKGAVRNLTR GMCADWAKYG LQINAIAPGY FKTPLNQALV DNPEFSSWLE KRTPAGRWGN VDELVGAAVF LSGRGSSFIN GHTLYVDGGI TTCL
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