Gene Rleg_6390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6390 
Symbol 
ID8017004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp101763 
End bp103577 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content65% 
IMG OID644828185 
ProductChloride channel core 
Protein accessionYP_002979385 
Protein GI241554172 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.315587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.638262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGC ATCCACCAAA CAACCGGCCG CACGATTTCA CCGGCGGTCT TTCCCGGCGC 
GAGGCCGGCG ATTTCACCAC CGACAGGCGG GTCCTCCTCC TGGTCGGCAT GTCCATCATT
GTCGGCACCG CCGGCGCGTT TGCCGCCTGG TGTCTCGTCA GCCTCATTGC GCTGGTGACG
AATGTCATCT GGTTCGGGCA GATCGGCATC CAGCCTGCCT CTCTGGCTGC GGTGCCGCGC
TCGCTGTGGG TGGTGCTTGT TCCGCCGCTG GGTGGACTTG TCATCGGACT GATGGCCCGT
TTCGGGTCGG AGAAGATCCG CGGCCACGGC ATTCCCGAGG CGATCGAGGC CATCCTGATC
GGCGGCAGCC GGATGTCGCC GAAGGTCGCG GTCCTGAAGC CGCTGTCGTC TGCCATTTCC
ATCGGAACCG GCGGCCCGTT CGGCGCCGAG GGGCCGATCA TCATGACCGG CGGTGCGATC
GGATCGCTGT TCGCGCAATT CTTTCACATG AGTGCGGCCG AGCGGAAAAC GCTGCTCGTC
GCCGGTGCGG CCGCAGGCAT GACGGCGATT TTCGGTTCGC CGATCGCCGC GGTCATGCTG
GCGGTCGAAC TGCTGTTGTT CGAATGGAAG CCGCGCAGCT TCATTCCCGT CGCCGTTGCC
GCCTGCGTGT CGATCTGCTG GCGCCCGCTG CTGTTCGGCG TCGGCCCGCT GTTCCCGACC
CACTTCCAGG TGGCCTTGCC CTGGTGGGGT ATTTTTGCCT GTGCGGCGAT GGGCATCATC
TCCGGCCTGC AATCGGGATT GCTGACGACG CTGCTCTACC GGATCGAGGA CCTGTTCGAA
GCCTTGCCGA TCCACTGGAT GTGGTGGCCG GCGCTCGGCG GTCTCGTCAT CGGTCTCGGC
GGCCTGATCG AACCGCGGGC AATGGGCGTC GGCTACGACA TCATCGATGG CTTGCTCAAC
AACCGGCTGC TCGCCCCGGC TGTCATGTCG ATCCTGCTGG TGAAGACGAT CATCTGGCTG
TTTGCCCTGT CGTCGGGCAC CTCCGGTGGC GTGCTTGCGC CGCTCCTCAT CTTCGGCGGG
GCTCTCGGAT GGCTGGTCGG TCTTGTCATG CCGGGCAATG ATCCCGGCTT CTGGGCGCTG
CTCGGAATGG CGGCGATGAT GGGTGGAACC ATGCGTGCAC CGCTGACGGG CACTTTCTTT
GCGATGGAGA TCACCGGCGA CGTCAGCACG CTCGTTCCGC TGCTTGCCGC AACCGTGGTG
GCCTATGCCG TCACCGTGCT TTTGCTGCGC CGCTCGATCC TGACCGAGAA GATCGCCCGC
CGCGGTCAGC ACATCACCCG CGAATATGGC GTCGACCCGT TCGAACTGTC GCGCGCAAGC
GAGATCATGA TCAGCGATGT CGACACGCTT CCCGTCGCCA TGACGATGGG AGAGGCCTGC
GATTTCTTTG CCTCGCAGCG GAAGACGCAC CGGATCTATC CGGTGGTCGA TGCGACAGGC
AGGCTGGCCG GCGTCGTATC GAGAGCCGAC GCTCTGCTCT GGCAGGGGAA TCCGGACCTT
GCCAGCCAGA CGCTCGCGGA AAACGTGACG GATGATTCCG TTCCGGTGGG GCATCCTGAT
GATACGGTCG CATTCATCGC CGATCTGATG CTGTCGACCG GCGACGGACG CATTCCGATC
GTCGATCCGA CCTCAGGGAA ATTGTGCGGC CTGATCGCCC GCAAGGATCT GCTGCGGCTG
CGCAGTTCCT ACAGGTCGGC GGAACTGGAT CGGCGCCCGT ATCTCACCGC CAGCTCGAAG
AGCAAGTCGC GGTAG
 
Protein sequence
MAQHPPNNRP HDFTGGLSRR EAGDFTTDRR VLLLVGMSII VGTAGAFAAW CLVSLIALVT 
NVIWFGQIGI QPASLAAVPR SLWVVLVPPL GGLVIGLMAR FGSEKIRGHG IPEAIEAILI
GGSRMSPKVA VLKPLSSAIS IGTGGPFGAE GPIIMTGGAI GSLFAQFFHM SAAERKTLLV
AGAAAGMTAI FGSPIAAVML AVELLLFEWK PRSFIPVAVA ACVSICWRPL LFGVGPLFPT
HFQVALPWWG IFACAAMGII SGLQSGLLTT LLYRIEDLFE ALPIHWMWWP ALGGLVIGLG
GLIEPRAMGV GYDIIDGLLN NRLLAPAVMS ILLVKTIIWL FALSSGTSGG VLAPLLIFGG
ALGWLVGLVM PGNDPGFWAL LGMAAMMGGT MRAPLTGTFF AMEITGDVST LVPLLAATVV
AYAVTVLLLR RSILTEKIAR RGQHITREYG VDPFELSRAS EIMISDVDTL PVAMTMGEAC
DFFASQRKTH RIYPVVDATG RLAGVVSRAD ALLWQGNPDL ASQTLAENVT DDSVPVGHPD
DTVAFIADLM LSTGDGRIPI VDPTSGKLCG LIARKDLLRL RSSYRSAELD RRPYLTASSK
SKSR