Gene Rleg_6371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6371 
Symbol 
ID8016985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp82816 
End bp83523 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content59% 
IMG OID644828166 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002979366 
Protein GI241554153 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.128297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.494562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGTT TCGACCTTTC GGCAATCCTG GGAAATCCGG AATATACCGC CATGCTGCTG 
CATGGCATCG AGATGACCTT CATCATCTAC GCCGGCTCTT GGTCGATGGC GATGGCGCTG
GCACTTCTGC TGCTGGCTTT GCGTTTGTCG CCCTTTCGTT TCGGTGATCC GTTAGTCGCT
GCTTACGTAT CCTACCACCG TAACGTCCCC ACCCTGGTTC AGCTGATGCT GTGGTATTTC
GGGATTTTCA CCCTGATGCC GAGCGGGGTA GCCGAATGGC TGGCCGTCCA TAATGCCGAG
GCCATCTTCG CGGTGATCGG GCTCGGGCTC TGCCAGGCGG CCTATTTCAG CGAAGATCTT
CGTTCGGGCG TGCGCTCGGT CAGTCCAGGC CAGATGCAGG CAGCCCGCGC GCTTGGCCAC
GGTTATGTCT CGGCGATGCG TTTCGTCATC ATGCCGCAAG GCGTGCGCAA CGCGCTGCCG
CCGCTCATCA ATCACAGCGT TTCCCTGTTC AAGAACAGCA GTCTCGCCGT CGTCATCGGA
GCCTCGGAAC TGACGCATGC CGTCAAGGAA ATCGAGAACC TCAGCTTCCG GACCTTCGAG
ATCTACCTGA TCGGCACAGT TCTCTACCTC TTCTTCTCGC TCGTGATCAT GAGCATCGGC
GCCTATCTGT CGATGCGCAC CGATCCTGCC AGGAGTGCGC GAGCATGA
 
Protein sequence
MSGFDLSAIL GNPEYTAMLL HGIEMTFIIY AGSWSMAMAL ALLLLALRLS PFRFGDPLVA 
AYVSYHRNVP TLVQLMLWYF GIFTLMPSGV AEWLAVHNAE AIFAVIGLGL CQAAYFSEDL
RSGVRSVSPG QMQAARALGH GYVSAMRFVI MPQGVRNALP PLINHSVSLF KNSSLAVVIG
ASELTHAVKE IENLSFRTFE IYLIGTVLYL FFSLVIMSIG AYLSMRTDPA RSARA