Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6371 |
Symbol | |
ID | 8016985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | + |
Start bp | 82816 |
End bp | 83523 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644828166 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002979366 |
Protein GI | 241554153 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.128297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.494562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGTT TCGACCTTTC GGCAATCCTG GGAAATCCGG AATATACCGC CATGCTGCTG CATGGCATCG AGATGACCTT CATCATCTAC GCCGGCTCTT GGTCGATGGC GATGGCGCTG GCACTTCTGC TGCTGGCTTT GCGTTTGTCG CCCTTTCGTT TCGGTGATCC GTTAGTCGCT GCTTACGTAT CCTACCACCG TAACGTCCCC ACCCTGGTTC AGCTGATGCT GTGGTATTTC GGGATTTTCA CCCTGATGCC GAGCGGGGTA GCCGAATGGC TGGCCGTCCA TAATGCCGAG GCCATCTTCG CGGTGATCGG GCTCGGGCTC TGCCAGGCGG CCTATTTCAG CGAAGATCTT CGTTCGGGCG TGCGCTCGGT CAGTCCAGGC CAGATGCAGG CAGCCCGCGC GCTTGGCCAC GGTTATGTCT CGGCGATGCG TTTCGTCATC ATGCCGCAAG GCGTGCGCAA CGCGCTGCCG CCGCTCATCA ATCACAGCGT TTCCCTGTTC AAGAACAGCA GTCTCGCCGT CGTCATCGGA GCCTCGGAAC TGACGCATGC CGTCAAGGAA ATCGAGAACC TCAGCTTCCG GACCTTCGAG ATCTACCTGA TCGGCACAGT TCTCTACCTC TTCTTCTCGC TCGTGATCAT GAGCATCGGC GCCTATCTGT CGATGCGCAC CGATCCTGCC AGGAGTGCGC GAGCATGA
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Protein sequence | MSGFDLSAIL GNPEYTAMLL HGIEMTFIIY AGSWSMAMAL ALLLLALRLS PFRFGDPLVA AYVSYHRNVP TLVQLMLWYF GIFTLMPSGV AEWLAVHNAE AIFAVIGLGL CQAAYFSEDL RSGVRSVSPG QMQAARALGH GYVSAMRFVI MPQGVRNALP PLINHSVSLF KNSSLAVVIG ASELTHAVKE IENLSFRTFE IYLIGTVLYL FFSLVIMSIG AYLSMRTDPA RSARA
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