| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6248 |
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| Symbol | |
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| ID | 8016119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012852 |
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| Strand | - |
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| Start bp | 311449 |
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| End bp | 313071 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644827551 |
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| Product | Choline dehydrogenase |
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| Protein accession | YP_002978751 |
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| Protein GI | 241258867 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.430458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.749743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCGA GTGACCGTTA CGATTACATC ATCGTTGGTG GAGGAAGCTC CGCCTGCGTC
GTCGCCGAGA AACTGGTGCG CGAGGGCAAG GCGCGCGTCC TGCTTCTGGA GCGCGGACCC
GCAAAAGCCA ATCCGATCAT GAGCTTTCCA GCCGGGTATA TGAAGTTCCT TGCCAAAGAC
ACATATCTCG CCATGCATCA AACCAAGCCG CAGCCCCAAC TGGACGGCCG TGGTCCCATT
GTGCCGCAGG GCAAGGTTCT AGGTGGCGGC AGTGCCGTCA ACGCGATGGT CTACATGCGC
GGACAGGAGG CGGATTTTGA TCTTTGGAAC GAACTGGTCA CGCCGAAAGG ATCCAATGAC
GGCGCCTGGT CCTACGGCGA CCTGCTTCCA TATTTTAAGG CGCAGGAGGA CAATGATCAT
CTTGCCGGCG ACTTCCATGG TGTCGGCGGG CCGCTGAAGA TCTCACATCT TGGACACACA
AGTGCGATGA CACGGACCTA CGTGAAAACC CTGCAAGCCA TGGGAATCCC CTACAACCCG
GACTTCAACG GCGCACATCA GTTTGGCGTC GGATTCATGC AGCATACCAT AGACTGGAAG
ACCAGAAGGC GGTCCAGCGC CGTCGATGCC TTCCTCGCAC CGGTGATGAG CGATCCGCTG
CTGACCATCG AGACGGAAGC GACCGTCACC TCGATCAGGA TGGAAAGCGA TCGCGCGACT
GGCGTCGATT ACATACGCAA CGGGAGCCGG AAATCCGCGA GCGCGGGGGA GATCATTCTT
GCCGCTGGAG CCTACCAGAC GCCAAAACTG CTGATGATTT CTGGTGTTGG ACCGGATGAC
GAACTCACCA AGCATAATAT CCAGAAGAAA GTCGTGCTGC CTGGCGTCGG CAAAAACCTG
CAGGATCATT ACGAGTGCCC GGTCGTTGCA ACCACGAAGG GGGCGTTTGG CTATTACGGT
GCGGACCGAG GCTGGCCGAT GATCAAAGCT GGGCTGCAGT ATCTCATGTT CAAGACGGGT
CCGGTGTCGA CGACTGGGGT GGAGACCTGC GCGTTCTACG ACCCTGACGG CAATAACGAT
CGACCGACGA TCCAGATGTT CTGTGTGCCG ACCGTCTACC TGGACCGGGA CGTCATGGGC
ACCGAACCCG GTGATGGCGT CACGATCAAC TCGCTTCTGC TTCGTCCAAA GGCGAGAGGA
TCGGTGACGT TGGCCTCAAG CGATCCATTC GAAAACCCGA TCGTCGACAC CCAGATCTTC
GGCCATCCCG ATGACCTGCG CCTGACCATT GCAGGGTTCC GGTTCGCCCG GACGGTTCTC
GAAGCGTCCC CCATGCGTGA GCTGATCGAA AAAGAGATAT TCCCTGGCGC GGACGCGACA
AGTGACGAGG CCCTCGCCGC TCATTGCAAG CGCACTGTTA AAACCGGCTA TCACCCTGTC
GGCACGTGCA AGATGGGTCA AGACAGCGAC CCAGATGCGG TCCTGGATTC CAGCCTCAGG
GTCTGGGGTA CACGAGGCTT GCGGGTCGTA GACGCGTCTC TGATGCCAAC GATCGTCAGC
GGCAACACCA ACGCTGCCGT CATGGCTGCG GCAGGCAAAG CTGCCGGCCT TATCCTCGCA
TAG
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| Protein sequence | MPASDRYDYI IVGGGSSACV VAEKLVREGK ARVLLLERGP AKANPIMSFP AGYMKFLAKD
TYLAMHQTKP QPQLDGRGPI VPQGKVLGGG SAVNAMVYMR GQEADFDLWN ELVTPKGSND
GAWSYGDLLP YFKAQEDNDH LAGDFHGVGG PLKISHLGHT SAMTRTYVKT LQAMGIPYNP
DFNGAHQFGV GFMQHTIDWK TRRRSSAVDA FLAPVMSDPL LTIETEATVT SIRMESDRAT
GVDYIRNGSR KSASAGEIIL AAGAYQTPKL LMISGVGPDD ELTKHNIQKK VVLPGVGKNL
QDHYECPVVA TTKGAFGYYG ADRGWPMIKA GLQYLMFKTG PVSTTGVETC AFYDPDGNND
RPTIQMFCVP TVYLDRDVMG TEPGDGVTIN SLLLRPKARG SVTLASSDPF ENPIVDTQIF
GHPDDLRLTI AGFRFARTVL EASPMRELIE KEIFPGADAT SDEALAAHCK RTVKTGYHPV
GTCKMGQDSD PDAVLDSSLR VWGTRGLRVV DASLMPTIVS GNTNAAVMAA AGKAAGLILA
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